RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CPEB1Q9BZB8 566 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 NEUROG2Q9H2A3 272 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 MFSD1Q9H3U5 465 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 MED4Q9NPJ6 270 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 MTRF1LQ9UGC7 380 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 FBXL21Q9UKT6 434 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 CA14Q9ULX7 337 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
SPG7-209ENST00000564047 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 CEP250Q9BV73 2442 aa13.04□□□□□ -0.32
SPG7-209ENST00000564047 ACACBO00763 2458 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 LOC285095A0A1B0GVY8 99 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 MED19A0JLT2 244 aaPredicted RBP13.03□□□□□ -0.32
SPG7-209ENST00000564047 ALOX15BO15296 676 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 SOCS5O75159 536 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 MLNP12872 115 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 PRKCHP24723 683 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 NTSR1P30989 418 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 TIE1P35590 1138 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 SEC13P55735 322 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 STARD6P59095 220 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 CDK18Q07002 472 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 BCL2L1Q07817 233 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 CBLBQ13191 982 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 CCINQ13939 588 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 SPARCL1Q14515 664 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 HSF5Q4G112 596 aaPredicted RBP13.03□□□□□ -0.32
SPG7-209ENST00000564047 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 SDE2Q6IQ49 451 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 LRRC8BQ6P9F7 803 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 RANBP10Q6VN20 620 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
SPG7-209ENST00000564047 VOPP1Q96AW1 172 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 IFT43Q96FT9 208 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 LRIG1Q96JA1 1093 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 FEM1CQ96JP0 617 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 SERPINB12Q96P63 405 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 ACOX2Q99424 681 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 FMO2Q99518 471 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 TBL1YQ9BQ87 522 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 FICDQ9BVA6 458 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 FSD1LQ9BXM9 530 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 TDRD1Q9BXT4 1180 aaKnown RBP13.03□□□□□ -0.32
SPG7-209ENST00000564047 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 ATP13A3Q9H7F0 1226 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 ARNT2Q9HBZ2 717 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 XAB2Q9HCS7 855 aaKnown RBP13.03□□□□□ -0.32
SPG7-209ENST00000564047 CASS4Q9NQ75 786 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
SPG7-209ENST00000564047 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.32
SPG7-209ENST00000564047 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.32
SPG7-209ENST00000564047 MUC22E2RYF6 1773 aaPredicted RBP13.02□□□□□ -0.32
SPG7-209ENST00000564047 SHROOM3Q8TF72 1996 aa13.02□□□□□ -0.32
SPG7-209ENST00000564047 A0A1W2PQ67 120 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 KRBA1A5PL33 1030 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 ANTXRLA6NF34 631 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 GOLGA8MH3BSY2 632 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 HTRA2O43464 458 aaPredicted RBP13.02□□□□□ -0.33
SPG7-209ENST00000564047 BNIP3LO60238 219 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 FZD6O60353 706 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 SIN3BO75182 1162 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 AGTP01019 485 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 EPHX1P07099 455 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 MYBL2P10244 700 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 HLA-EP13747 358 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 HLA-DPA1P20036 260 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 CD72P21854 359 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 SERPINA4P29622 427 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.33
SPG7-209ENST00000564047 ARL4CP56559 192 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 TRAF2Q12933 501 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
SPG7-209ENST00000564047 PCSK7Q16549 785 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 C9orf64Q5T6V5 341 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 CEP128Q6ZU80 1094 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 ZNF534Q76KX8 674 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.33
SPG7-209ENST00000564047 PDIK1LQ8N165 341 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 SYNPOQ8N3V7 929 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 CHST14Q8NCH0 376 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 OR6K2Q8NGY2 324 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 OR8D1Q8WZ84 308 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 ZNF641Q96N77 438 aaPredicted RBP13.02□□□□□ -0.33
SPG7-209ENST00000564047 TRIB3Q96RU7 358 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 NELL2Q99435 816 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 GABRG3Q99928 467 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 OSBPL1AQ9BXW6 950 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 MTG2Q9H4K7 406 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 PRSS16Q9NQE7 514 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 IL36AQ9UHA7 158 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.33
SPG7-209ENST00000564047 PCDHGC4Q9Y5F7 938 aa13.02□□□□□ -0.33
SPG7-209ENST00000564047 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms