RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ERMP1Q7Z2K6 904 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 PIP4P1Q86T03 277 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 RFX6Q8HWS3 928 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 SPOCK2Q92563 424 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 NOD2Q9HC29 1040 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 CA5BQ9Y2D0 317 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 FNDC3AQ9Y2H6 1198 aaKnown RBP20.47■□□□□ 0.87
CMTM3-206ENST00000563672 SPTBN2O15020 2390 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 PLXNA2O75051 1894 aa20.47■□□□□ 0.87
CMTM3-206ENST00000563672 A0A0U1RQJ8 604 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 KCNK3O14649 394 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 ZRANB2O95218 330 aaKnown RBP eCLIP20.46■□□□□ 0.87
CMTM3-206ENST00000563672 PAK4O96013 591 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-206ENST00000563672 CSRP1P21291 193 aaKnown RBP20.46■□□□□ 0.87
CMTM3-206ENST00000563672 AKT2P31751 481 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 NXPH1P58417 271 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 MAXP61244 160 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 TMEM52BQ4KMG9 183 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 ALG1LQ6GMV1 187 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 SPOCD1Q6ZMY3 1216 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 RCOR2Q8IZ40 523 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 TXLNBQ8N3L3 684 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 LRRC57Q8N9N7 239 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 LRRN4Q8WUT4 740 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 KRT35Q92764 455 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 ZNF830Q96NB3 372 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-206ENST00000563672 OLFM3Q96PB7 478 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 LENG8Q96PV6 779 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-206ENST00000563672 NT5MQ9NPB1 228 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 PCDH12Q9NPG4 1184 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 SCUBE2Q9NQ36 999 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 AMACRQ9UHK6 382 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 PCDHA3Q9Y5H8 950 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 HEY1Q9Y5J3 304 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 HS3ST3A1Q9Y663 406 aa20.46■□□□□ 0.87
CMTM3-206ENST00000563672 H0Y8X5 98 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 HTRA2O43464 458 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 DFNA5O60443 496 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 SOCS5O75159 536 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 KRT10P13645 584 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 CCNB1P14635 433 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 XPAP23025 273 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 CTNNA1P35221 906 aaKnown RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 NAP1L1P55209 391 aaKnown RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 PPIDQ08752 370 aaKnown RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 ELP6Q0PNE2 266 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 KIF5AQ12840 1032 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 SGCGQ13326 291 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 CFAP58Q5T655 872 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 NPNTQ6UXI9 565 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 DBX2Q6ZNG2 339 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 CCDC13Q8IYE1 715 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 CCNYQ8ND76 341 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 EXD1Q8NHP7 514 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 KIAA1524Q8TCG1 905 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 LGMNQ99538 433 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 KLF6Q99612 283 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 FZD3Q9NPG1 666 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 TM7SF3Q9NS93 570 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 RBM22Q9NW64 420 aaKnown RBP eCLIP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.45■□□□□ 0.86
CMTM3-206ENST00000563672 PCDHGC4Q9Y5F7 938 aa20.45■□□□□ 0.86
CMTM3-206ENST00000563672 GRID2IPA4D2P6 1211 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 RAD51BO15315 384 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 MMP20O60882 483 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 KCNK5O95279 499 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 POLR2LP62875 67 aaKnown RBP20.44■□□□□ 0.86
CMTM3-206ENST00000563672 DYNLT1P63172 113 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 TFDP2Q14188 446 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 PDK1Q15118 436 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 TFDP3Q5H9I0 405 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 PPM1JQ5JR12 505 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 ERAP2Q6P179 960 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 GCNT7Q6ZNI0 430 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 ABI3BPQ7Z7G0 1075 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 SPATS2Q86XZ4 545 aaKnown RBP20.44■□□□□ 0.86
CMTM3-206ENST00000563672 RBM41Q96IZ5 413 aaKnown RBP20.44■□□□□ 0.86
CMTM3-206ENST00000563672 ELF4Q99607 663 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-206ENST00000563672 MYOCQ99972 504 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 POLR1EQ9GZS1 481 aaKnown RBP20.44■□□□□ 0.86
CMTM3-206ENST00000563672 GDF3Q9NR23 364 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 TRIM10Q9UDY6 481 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 ATP8A1Q9Y2Q0 1164 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 PCDHGB2Q9Y5G2 931 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 ADGRG1Q9Y653 693 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 DOCK9Q9BZ29 2069 aa20.44■□□□□ 0.86
CMTM3-206ENST00000563672 TRPM6Q9BX84 2022 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 hCG_1818297A0A087WSY0 165 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 A0A1W2PQ67 120 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 CST8O60676 142 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 MAGEC1O60732 1142 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 PRKCGP05129 697 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 CTNNA2P26232 953 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 MMP12P39900 470 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 NR2C2P49116 596 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 PEX5P50542 639 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 CLDN2P57739 230 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 ADCY2Q08462 1091 aa20.43■□□□□ 0.86
CMTM3-206ENST00000563672 TRAF2Q12933 501 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms