RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MRFAP1Q9Y605 127 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 ZNF318Q5VUA4 2279 aa18.98■□□□□ 0.63
RAB40C-207ENST00000563109 UPK3BL1B0FP48 263 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 UPK3BL2E5RIL1 263 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 PLK4O00444 970 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 TRAFD1O14545 582 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-207ENST00000563109 PMPCBO75439 489 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 PGLSO95336 258 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 MT-CYBP00156 380 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-207ENST00000563109 CD6P30203 668 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 FDFT1P37268 417 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 SUOXP51687 545 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 EPHB1P54762 984 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 PPP1R7Q15435 360 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 MAP7D1Q3KQU3 841 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 PIP5KL1Q5T9C9 394 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 AGBL4Q5VU57 503 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 SLC36A4Q6YBV0 504 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 TTC7BQ86TV6 843 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 C11orf74Q86VG3 221 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 MNS1Q8NEH6 495 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 SPATA4Q8NEY3 305 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 RLN3Q8WXF3 142 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 VOPP1Q96AW1 172 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 NSMCE3Q96MG7 304 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 FSD1LQ9BXM9 530 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 ADGRE3Q9BY15 652 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 NEUROG2Q9H2A3 272 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 UBP1Q9NZI7 540 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 SERGEFQ9UGK8 458 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 ARIH1Q9Y4X5 557 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-207ENST00000563109 PCDHGA2Q9Y5H1 932 aa18.97■□□□□ 0.63
RAB40C-207ENST00000563109 IGHV1OR15-9A0A0B4J2B8 117 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 E7EVH7 732 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 NDUFS2O75306 463 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 RPP40O75818 363 aaKnown RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 KRT14P02533 472 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 ETS1P14921 441 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 CNR2P34972 360 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 LMAN1P49257 510 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 ADPRHP54922 357 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 RPL26P61254 145 aaKnown RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 C2orf54Q08AI8 447 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 ELP6Q0PNE2 266 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 CCDC70Q6NSX1 233 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 ERAP2Q6P179 960 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 ZC3H14Q6PJT7 736 aaKnown RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 ZNF572Q7Z3I7 529 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 TAB3Q8N5C8 712 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 LPCAT1Q8NF37 534 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 IPMKQ8NFU5 416 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 OR14C36Q8NHC7 312 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 GAB3Q8WWW8 586 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 NELL1Q92832 810 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 TADA1Q96BN2 335 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 TOE1Q96GM8 510 aaKnown RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 OXNAD1Q96HP4 312 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 CD93Q9NPY3 652 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 PCYOX1Q9UHG3 505 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 PHTF1Q9UMS5 762 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 RPL26L1Q9UNX3 145 aaKnown RBP18.96■□□□□ 0.63
RAB40C-207ENST00000563109 CHKBQ9Y259 395 aa18.96■□□□□ 0.63
RAB40C-207ENST00000563109 LRRC72A6NJI9 287 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 NEMP1O14524 444 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 PSMD3O43242 534 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 MAP3K13O43283 966 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 METTL18O95568 372 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 SEMA4FO95754 770 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 ZSCAN5DPP0CG00 497 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 RPL22P35268 128 aaKnown RBP18.95■□□□□ 0.62
RAB40C-207ENST00000563109 WNT3AP56704 352 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 DR1Q01658 176 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 CDK18Q07002 472 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 UGP2Q16851 508 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 FAXCQ5TGI0 409 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 KDELC1Q6UW63 502 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 SYDE1Q6ZW31 735 aaPredicted RBP18.95■□□□□ 0.62
RAB40C-207ENST00000563109 USP45Q70EL2 814 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 PRUNE1Q86TP1 453 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 GLIS1Q8NBF1 620 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 CCHCR1Q8TD31 782 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 SPOCK2Q92563 424 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 SLCO2A1Q92959 643 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 FAM131CQ96AQ9 280 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 FEM1CQ96JP0 617 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 KRT12Q99456 494 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 IRF2BPLQ9H1B7 796 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 KDM4CQ9H3R0 1056 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 RAB6BQ9NRW1 208 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 INVSQ9Y283 1065 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 CUL9Q8IWT3 2517 aa18.95■□□□□ 0.62
RAB40C-207ENST00000563109 PLRG1O43660 514 aaKnown RBP18.94■□□□□ 0.62
RAB40C-207ENST00000563109 AP1G1O43747 822 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 FZD6O60353 706 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 TIMP2P16035 220 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 ABL2P42684 1182 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 GRIA4P48058 902 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 VPS41P49754 854 aa18.94■□□□□ 0.62
RAB40C-207ENST00000563109 BASP1P80723 227 aaKnown RBP18.94■□□□□ 0.62
RAB40C-207ENST00000563109 DHX34Q14147 1143 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms