RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ACAP1Q15027 740 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 CCDC122Q5T0U0 273 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 CFAP58Q5T655 872 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 ALKBH5Q6P6C2 394 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 SRLQ86TD4 932 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 NIPA2Q8N8Q9 360 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 OR4C6Q8NH72 309 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 ASB12Q8WXK4 309 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 SUV39H2Q9H5I1 410 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 PCDH12Q9NPG4 1184 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 IP6K2Q9UHH9 426 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 IPO11Q9UI26 975 aaKnown RBP17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 NENFQ9UMX5 172 aa17.37■□□□□ 0.37
CDC42BPB-208ENST00000561271 TAF4O00268 1085 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 MUSKO15146 869 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 NEBLO76041 1014 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 GIMD1P0DJR0 217 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 NME1P15531 152 aaKnown RBP17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 CKMT2P17540 419 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 GJC1P36383 396 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 PFN3P60673 137 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 DAB2P98082 770 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 IL10RBQ08334 325 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 ELP6Q0PNE2 266 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 GRM3Q14832 879 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 IRF4Q15306 451 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 HES3Q5TGS1 186 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 TMCO3Q6UWJ1 677 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 POLNQ7Z5Q5 900 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 PROSER1Q86XN7 944 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 CPNE8Q86YQ8 564 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 DCP2Q8IU60 420 aaKnown RBP17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 TP53I13Q8NBR0 393 aaPredicted RBP17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZNF548Q8NEK5 533 aaPredicted RBP17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 CENPTQ96BT3 561 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 IFT43Q96FT9 208 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 CSPG4P5Q96PW8 444 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 TUBGCP5Q96RT8 1024 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 CCDC86Q9H6F5 360 aaKnown RBP17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 PCDH18Q9HCL0 1135 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 KLF15Q9UIH9 416 aa17.36■□□□□ 0.37
CDC42BPB-208ENST00000561271 ITPR1Q14643 2758 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 TPM3P06753 285 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 C1SP09871 688 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 C6P13671 934 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 SERPINA4P29622 427 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 EIF4A3P38919 411 aaKnown RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 MMP12P39900 470 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 THOP1P52888 689 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 HNRNPKP61978 463 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 SLC10A7Q0GE19 358 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 EIF2B5Q13144 721 aaKnown RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZNF211Q13398 564 aaPredicted RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 UGP2Q16851 508 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 TMEM52BQ4KMG9 183 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 BOLA3Q53S33 107 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 HS1BP3Q53T59 392 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 TMCO4Q5TGY1 634 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 RBFAQ8N0V3 343 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZNF564Q8TBZ8 553 aaPredicted RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 TEKT4Q8WW24 435 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZNF641Q96N77 438 aaPredicted RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 C1QTNF7Q9BXJ2 289 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 ATP13A3Q9H7F0 1226 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 MBNL1Q9NR56 388 aaKnown RBP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 ATP8A1Q9Y2Q0 1164 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 SCN8AQ9UQD0 1980 aa17.35■□□□□ 0.37
CDC42BPB-208ENST00000561271 H3BM21 787 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 CSF2P04141 144 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 MYF5P13349 255 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 ACP1P24666 158 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 HNF1BP35680 557 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 SSR1P43307 286 aaKnown RBP17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 CSNK1DP48730 415 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 SUOXP51687 545 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 CAMK2BQ13554 666 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 KRT81Q14533 505 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZNF235Q14590 738 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 RFTN1Q14699 578 aaPredicted RBP17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 LBRQ14739 615 aaKnown RBP17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 ERAP2Q6P179 960 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 BRAT1Q6PJG6 821 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 TMPRSS12Q86WS5 348 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 ATPAF2Q8N5M1 289 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 LZTR1Q8N653 840 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 PAF1Q8N7H5 531 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 HCAR2Q8TDS4 363 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 NSMCE3Q96MG7 304 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 PACSIN1Q9BY11 444 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 TCEAL2Q9H3H9 227 aaPredicted RBP17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 NLGN3Q9NZ94 848 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 SEPT3Q9UH03 358 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 PNMA8BQ9ULN7 279 aaPredicted RBP17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 ZFHX4Q86UP3 3567 aa17.34■□□□□ 0.37
CDC42BPB-208ENST00000561271 NBEAQ8NFP9 2946 aa17.33■□□□□ 0.37
CDC42BPB-208ENST00000561271 TTC24A2A3L6 582 aaPredicted RBP17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 TRABD2BA6NFA1 517 aa17.33■□□□□ 0.36
CDC42BPB-208ENST00000561271 RIOK3O14730 519 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms