RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ACTN2P35609 894 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 EIF4A3P38919 411 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 PAPOLAP51003 745 aaKnown RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 CA9Q16790 459 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 UGP2Q16851 508 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 PRRT3Q5FWE3 981 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 MACC1Q6ZN28 852 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 LRRC69Q6ZNQ3 347 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 PHACTR4Q8IZ21 702 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 RBFAQ8N0V3 343 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 MAPK15Q8TD08 544 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 TBATAQ96M53 351 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 ZNF641Q96N77 438 aaPredicted RBP16.38■□□□□ 0.21
SNX1-213ENST00000561026 DEPDC7Q96QD5 511 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 SLC39A8Q9C0K1 460 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 HAUS4Q9H6D7 363 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 AIPL1Q9NZN9 384 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
SNX1-213ENST00000561026 CPED1A4D0V7 1026 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 EME2A4GXA9 379 aaPredicted RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 ARHGAP42A6NI28 874 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 ATMINO43313 823 aaPredicted RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 BUB1BO60566 1050 aaPredicted RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 CSO75390 466 aaKnown RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 RNF8O76064 485 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 FTLP02792 175 aaPredicted RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 GZMAP12544 262 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 C1orf61Q13536 156 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 LRRC14Q15048 493 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 IRF4Q15306 451 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 ASIC2Q16515 512 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 WSCD2Q2TBF2 565 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 TBC1D25Q3MII6 688 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 FAXCQ5TGI0 409 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 AFMIDQ63HM1 303 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 GUSBP11Q6P575 273 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 BRAT1Q6PJG6 821 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 ZNF571Q7Z3V5 609 aaPredicted RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 TUBGCP5Q96RT8 1024 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 PEBP4Q96S96 227 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 SNRNP25Q9BV90 132 aaKnown RBP16.37■□□□□ 0.21
SNX1-213ENST00000561026 BOCQ9BWV1 1114 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 SLC13A1Q9BZW2 595 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 TRIM7Q9C029 511 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 PCDH12Q9NPG4 1184 aa16.37■□□□□ 0.21
SNX1-213ENST00000561026 BPTFQ12830 3046 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 A0A1W2PQC6 194 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 SMTNL1A8MU46 457 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 LMO7DNF2Z398 122 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 DAPK3O43293 454 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 LZTS3O60299 673 aaPredicted RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 USP12O75317 370 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 PALMO75781 387 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 ERCC2P18074 760 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 TGM2P21980 687 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 MIPP30301 263 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 PRKCIP41743 596 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 CSNK1DP48730 415 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 PEX5P50542 639 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 ADKP55263 362 aaKnown RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 PPARDQ03181 441 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 NR0B2Q15466 257 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 FILIP1LQ4L180 1135 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 ERAP2Q6P179 960 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 CYP4V2Q6ZWL3 525 aaPredicted RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 EFL1Q7Z2Z2 1120 aaKnown RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 CAMK1DQ8IU85 385 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 PSTKQ8IV42 348 aaKnown RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 TSEN2Q8NCE0 465 aaKnown RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 BBC3Q96PG8 261 aaPredicted RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 KCTD15Q96SI1 283 aaPredicted RBP16.36■□□□□ 0.21
SNX1-213ENST00000561026 LRRC61Q9BV99 259 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 COQ6Q9Y2Z9 468 aa16.36■□□□□ 0.21
SNX1-213ENST00000561026 PTPRQQ9UMZ3 2332 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 TMEM110-MUSTN1A8MSY1 372 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 DDX3XO00571 662 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNX1-213ENST00000561026 YY2O15391 372 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 MPOP05164 745 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 ANXA6P08133 673 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 C6P13671 934 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 TSHRP16473 764 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 RGRP47804 291 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 LSSP48449 732 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 HCAR3P49019 387 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 RPIAP49247 311 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 NSUN2Q08J23 767 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNX1-213ENST00000561026 ISXQ2M1V0 245 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
SNX1-213ENST00000561026 C6orf132Q5T0Z8 1188 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 CFAP58Q5T655 872 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 SRLQ86TD4 932 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 ZSWIM9Q86XI8 627 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 ARHGAP12Q8IWW6 846 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 LSMEM2Q8N112 164 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 TPCN2Q8NHX9 752 aa16.35■□□□□ 0.21
SNX1-213ENST00000561026 NAP1L5Q96NT1 182 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms