RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PIGVQ9NUD9 493 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 COX16Q9P0S2 106 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 SUCOQ9UBS9 1254 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 MYBPHLA2RUH7 354 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ARL5CA6NH57 179 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 TRIM38O00635 465 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 PABPC1P11940 636 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 MX2P20592 715 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 PSMD8P48556 350 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 RABGGTBP53611 331 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 DAOAP59103 153 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 MGAT3Q09327 533 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 NME3Q13232 169 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CRHR2Q13324 411 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 NAB1Q13506 487 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CEACAM7Q14002 265 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 TRIM16LQ309B1 348 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 CYP2U1Q7Z449 544 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 SERINC5Q86VE9 423 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 SNX32Q86XE0 403 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 MPP5Q8N3R9 675 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ARL10Q8N8L6 244 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 RNF169Q8NCN4 708 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 C3orf58Q8NDZ4 430 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ASB9Q96DX5 294 aa14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 ZNF641Q96N77 438 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 NPLQ9BXD5 320 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
RABGGTA-220ENST00000560998 FAM47E-STBD1D6RA91 191 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 HTRA2O43464 458 aaPredicted RBP14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 PGK1P00558 417 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 RALBP11234 206 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 GRIA1P42261 906 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 MS4A2Q01362 244 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 CTBSQ01459 385 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 GALNT2Q10471 571 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 GRSF1Q12849 480 aaKnown RBP eCLIP14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 PAFAH1B3Q15102 231 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 NRF1Q16656 503 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 MROH9Q5TGP6 573 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 ANKRD26P1Q6NSI1 321 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 AGMOQ6ZNB7 445 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 GPRIN1Q7Z2K8 1008 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 MRPL10Q7Z7H8 261 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 ZMIZ2Q8NF64 920 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 DEPDC1BQ8WUY9 529 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 SREK1Q8WXA9 508 aaKnown RBP14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 PCED1BQ96HM7 432 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 NSMCE3Q96MG7 304 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC9A7Q96T83 725 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 EFHD1Q9BUP0 239 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 ARMC7Q9H6L4 198 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 COG4Q9H9E3 785 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 WDR41Q9HAD4 459 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 TCF7L2Q9NQB0 619 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 ANLNQ9NQW6 1124 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 TMEM30AQ9NV96 361 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 CDH9Q9ULB4 789 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 CDC14AQ9UNH5 594 aa14.08□□□□□ -0.16
RABGGTA-220ENST00000560998 DYTNA2CJ06 578 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 YJEFN3A6XGL0 299 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 RNF103O00237 685 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 KDM1AO60341 852 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC10A3P09131 477 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 GABRB3P28472 473 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 RPL9P32969 192 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 ADRA1BP35368 520 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 GSSP48637 474 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 GLUD2P49448 558 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 SCNN1GP51170 649 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 BMXP51813 675 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 HNRNPFP52597 415 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 ARPC4P59998 168 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 SAPCD2Q86UD0 394 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MFSD2AQ8NA29 543 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 NETO2Q8NC67 525 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 SLC7A14Q8TBB6 771 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 TFAP2CQ92754 450 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 TAMM41Q96BW9 452 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 P2RY11Q96G91 374 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 CTRCQ99895 268 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 MROQ9BYG7 248 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 AGO3Q9H9G7 860 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 NMRK2Q9NPI5 230 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 CNGB3Q9NQW8 809 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 RIC8BQ9NVN3 520 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 COPG2Q9UBF2 871 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PTCH2Q9Y6C5 1203 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 PCNTO95613 3336 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 GOLGA8QA0A0J9YX86 632 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 KRBA1A5PL33 1030 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 GOLGA8OA6NCC3 632 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 CASTOR2A6NHX0 329 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 C9IYK1 514 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 HHLA1C9JL84 531 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 GOLGA8NF8WBI6 632 aa14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 EEF2KO00418 725 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-220ENST00000560998 DCLK1O15075 740 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms