RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HSPA9P38646 679 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 SUOXP51687 545 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 MAXP61244 160 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 AP1S1P61966 158 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 CCDC157Q569K6 752 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 GCNT7Q6ZNI0 430 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 Q6ZSR6 202 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 SPATS2Q86XZ4 545 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 TMTC1Q8IUR5 882 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 TMEM145Q8NBT3 493 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 C1QTNF2Q9BXJ5 285 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 NT5MQ9NPB1 228 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 PCDH12Q9NPG4 1184 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 HAUS2Q9NVX0 235 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 DDX56Q9NY93 547 aaKnown RBP13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 ANGPTL2Q9UKU9 493 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 BTBD3Q9Y2F9 522 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 HEY1Q9Y5J3 304 aa13.09□□□□□ -0.31
CTDSPL2-209ENST00000560620 KNL1Q8NG31 2342 aa13.08□□□□□ -0.31
CTDSPL2-209ENST00000560620 ANKRD36A6QL64 1941 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 POM121BA6NF01 834 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 GOLGA6L6A8MZA4 724 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 AREL1O15033 823 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 RAD51BO15315 384 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 LZTS3O60299 673 aaPredicted RBP13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 PCDHGA12O60330 932 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 SDC3O75056 442 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 NDUFA10O95299 355 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 MX2P20592 715 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 DYNLT1P63172 113 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 SEMG2Q02383 582 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 GALNT2Q10471 571 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 BNIP3Q12983 259 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 FGL2Q14314 439 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 VOPP1Q96AW1 172 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 CDC6Q99741 560 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 ERVMER34-1Q9H9K5 563 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 DNAJC28Q9NX36 388 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 APOBEC2Q9Y235 224 aaKnown RBP13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 ATP8A1Q9Y2Q0 1164 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 COQ6Q9Y2Z9 468 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 PCDHGC4Q9Y5F7 938 aa13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 EPN1Q9Y6I3 576 aaPredicted RBP13.08□□□□□ -0.32
CTDSPL2-209ENST00000560620 A8MX80 341 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 APOL1O14791 398 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 SPINT1O43278 529 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 LCA5LO95447 670 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 PEX11BO96011 259 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 EPHA8P29322 1005 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 LIG3P49916 1009 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 THOP1P52888 689 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 GBE1Q04446 702 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 PDE1CQ14123 709 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 HS1BP3Q53T59 392 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 ZNF542PQ5EBM4 170 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 KAZNQ674X7 775 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 KYAT3Q6YP21 454 aaKnown RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 ABI3BPQ7Z7G0 1075 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 DAAM2Q86T65 1068 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 ZSWIM9Q86XI8 627 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 DCP2Q8IU60 420 aaKnown RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 PGBD5Q8N414 524 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 EID2Q8N6I1 236 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 PNPLA1Q8N8W4 532 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 LRRN4Q8WUT4 740 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 BMFQ96LC9 184 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 LENG8Q96PV6 779 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 NUDCD1Q96RS6 583 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 BAG1Q99933 345 aaPredicted RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 MGME1Q9BQP7 344 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 POLR1EQ9GZS1 481 aaKnown RBP13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 GOLPH3Q9H4A6 298 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 NOD2Q9HC29 1040 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 FTSJ1Q9UET6 329 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 HS3ST3A1Q9Y663 406 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
CTDSPL2-209ENST00000560620 TSPAN11A1L157 253 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 MATN3O15232 486 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 CBFA2T3O75081 653 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 CPP00450 1065 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 ELFN1P0C7U0 828 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 C6P13671 934 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 CCNB1P14635 433 aa13.06□□□□□ -0.32
CTDSPL2-209ENST00000560620 ZFXP17010 805 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms