RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	DNAJC16	Q9Y2G8	782 aa		3.59	□□□□□ -1.83
SLTM-223	ENST00000560532	SLC45A1	Q9Y2W3	748 aa		3.59	□□□□□ -1.83
SLTM-223	ENST00000560532	IGKV6D-41	A0A0C4DH26	115 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	TARSL2	A2RTX5	802 aa	Known RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	NPIPB11	E5RHQ5	1161 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	IFRD1	O00458	451 aa	Predicted RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	DHX16	O60231	1041 aa	Known RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	CRYAA	P02489	173 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	TNNT1	P13805	278 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	RPL3	P39023	403 aa	Known RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	DPP6	P42658	865 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	DHX34	Q14147	1143 aa	Known RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	TAF5	Q15542	800 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	CTXN3	Q4LDR2	81 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	PLEKHO1	Q53GL0	409 aa	Predicted RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	DENND1B	Q6P3S1	775 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	UNQ6126/PRO20091	Q6UXV3	157 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	PATL1	Q86TB9	770 aa	Known RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	TMEM57	Q8N5G2	664 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	SPATA5	Q8NB90	893 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	SETD9	Q8NE22	299 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	CCT6B	Q92526	530 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	NCSTN	Q92542	709 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	CTDSP1	Q9GZU7	261 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	CLK4	Q9HAZ1	481 aa	Known RBP	3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	ITM2C	Q9NQX7	267 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	FBXO40	Q9UH90	709 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	PCDHGB3	Q9Y5G1	929 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	CLDN16	Q9Y5I7	305 aa		3.58	□□□□□ -1.84
SLTM-223	ENST00000560532	OR6C68	A6NDL8	312 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	IRAK2	O43187	625 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	PIP5K1C	O60331	668 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	CH25H	O95992	272 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	AMBP	P02760	352 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	CNP	P09543	421 aa	Known RBP	3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	PTPN9	P43378	593 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	IL13RA2	Q14627	380 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	AP5B1	Q2VPB7	878 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	ADCK5	Q3MIX3	580 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	FBXO47	Q5MNV8	452 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	SH2D4B	Q5SQS7	431 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	TUBA1A	Q71U36	451 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	OR4N2	Q8NGD1	307 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	RNFT2	Q96EX2	444 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	RBM17	Q96I25	401 aa	Known RBP	3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	TUBA1C	Q9BQE3	449 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	DCTN5	Q9BTE1	182 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	MSTO1	Q9BUK6	570 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	ZNF696	Q9H7X3	374 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	TMEM51	Q9NW97	253 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	DDX43	Q9NXZ2	648 aa	Known RBP	3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	GPR52	Q9Y2T5	361 aa		3.57	□□□□□ -1.84
SLTM-223	ENST00000560532	FAM172BP	A6NC97	362 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	P2RY10	O00398	339 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	TIMM23	O14925	209 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	RXRA	P19793	462 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	SSTR2	P30874	369 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	HNF1B	P35680	557 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	SKIV2L2	P42285	1042 aa	Known RBP	3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	HAL	P42357	657 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	ZNF132	P52740	706 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	ADORA2A-AS1	P86434	159 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	NAPEPLD	Q6IQ20	393 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	LDHAL6A	Q6ZMR3	332 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	C2CD5	Q86YS7	1000 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	TMC8	Q8IU68	726 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	EPHX4	Q8IUS5	362 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	USP38	Q8NB14	1042 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	CEP70	Q8NHQ1	597 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	RFWD2	Q8NHY2	731 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	MTBP	Q96DY7	904 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	FEM1C	Q96JP0	617 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	HERPUD2	Q9BSE4	406 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	CXorf56	Q9H5V9	222 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	UBTD1	Q9HAC8	227 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	ATP8A2	Q9NTI2	1148 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	NLK	Q9UBE8	527 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	DHDH	Q9UQ10	334 aa		3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	MORC2	Q9Y6X9	1032 aa	Predicted RBP	3.56	□□□□□ -1.84
SLTM-223	ENST00000560532	IGHV4OR15-8	A0A075B7B6	117 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	VWA3A	A6NCI4	1184 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	FAM90A7P	A6NKC0	464 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	FAM90A22P	A8MWA6	464 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	FAM90A12P	A8MX19	464 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	FAM90A23P	A8MXZ1	464 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	HNRNPCL2	B2RXH8	293 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	FAM157A	C9JC47	383 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	CHL1	O00533	1208 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	STRN	O43815	780 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	SLC22A3	O75751	556 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	PMS2P2	O95744	297 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	ZNF10	P21506	573 aa	Predicted RBP	3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	KCNA5	P22460	613 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	YWHAQ	P27348	245 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	FMO4	P31512	558 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	NLRP5	P59047	1200 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	SETMAR	Q53H47	684 aa	Predicted RBP	3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	PLA2G4F	Q68DD2	849 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	SPAG16	Q8N0X2	631 aa		3.55	□□□□□ -1.84
SLTM-223	ENST00000560532	ATOH1	Q92858	354 aa	Predicted RBP	3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms