RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ITGA2BP08514 1039 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 IQCF3P0C7M6 154 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 POLGP54098 1239 aaPredicted RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 DEFB103AP81534 67 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 ICA1Q05084 483 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 SIGLEC14Q08ET2 396 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 OS9Q13438 667 aaPredicted RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 MVPQ14764 893 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 MAP9Q49MG5 647 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 Q4G0T1 1027 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 TTC39AQ5SRH9 613 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 SNRNP48Q6IEG0 339 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 RINT1Q6NUQ1 792 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 KYAT3Q6YP21 454 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 RBM23Q86U06 439 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 TLK2Q86UE8 772 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 MYOCDQ8IZQ8 938 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 MIGA1Q8NAN2 632 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 NEK9Q8TD19 979 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 NSUN4Q96CB9 384 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 MRPL38Q96DV4 380 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 REXO5Q96IC2 774 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 C12orf42Q96LP6 360 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 YME1L1Q96TA2 773 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 RAD9AQ99638 391 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 ALDH8A1Q9H2A2 487 aaPredicted RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 ABHD16BQ9H3Z7 469 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 DNAJC18Q9H819 358 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 GJB4Q9NTQ9 266 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 LIN7CQ9NUP9 197 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 TMEM45AQ9NWC5 275 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 MTMR4Q9NYA4 1195 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 CD207Q9UJ71 328 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 SLC8A2Q9UPR5 921 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 PA2G4Q9UQ80 394 aaKnown RBP4.18□□□□□ -1.74
CHD8-212ENST00000557329 PCDHB2Q9Y5E7 798 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 PCDHGB2Q9Y5G2 931 aa4.18□□□□□ -1.74
CHD8-212ENST00000557329 ZNFX1Q9P2E3 1918 aaKnown RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 A0A1B0GUL7 405 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 FAM90A10PA6NDY2 464 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 MBD3L5A6NJ08 208 aaPredicted RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 C2CD4BA6NLJ0 364 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 MBTPS2O43462 519 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 ZBED4O75132 1171 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 ZC3H11AO75152 810 aaKnown RBP eCLIP4.17□□□□□ -1.74
CHD8-212ENST00000557329 CYP3A4P08684 503 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 IGFBP2P18065 325 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 ABCB4P21439 1286 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 SCP2P22307 547 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 RFC2P35250 354 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 IL15P40933 162 aaPredicted RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 MCM2P49736 904 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 AGTR2P50052 363 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 IKQ13123 557 aaPredicted RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 MORC3Q14149 939 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 RABEP1Q15276 862 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 RALBP1Q15311 655 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 SEC23BQ15437 767 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 EPC2Q52LR7 807 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 AWAT1Q58HT5 328 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 LIPMQ5VYY2 423 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 LVRNQ6Q4G3 990 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 LRIG3Q6UXM1 1119 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 ZNF793Q6ZN11 406 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 ARMCX2Q7L311 632 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 TRAPPC11Q7Z392 1133 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 RFX6Q8HWS3 928 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 ANKRD44Q8N8A2 993 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 CENPIQ92674 756 aaPredicted RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 TM2D2Q9BX73 214 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 RAVER2Q9HCJ3 691 aaKnown RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 AGO4Q9HCK5 861 aaKnown RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 DECR2Q9NUI1 292 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 HMG20BQ9P0W2 317 aa4.17□□□□□ -1.74
CHD8-212ENST00000557329 AGO2Q9UKV8 859 aaKnown RBP4.17□□□□□ -1.74
CHD8-212ENST00000557329 SPTBN4Q9H254 2564 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 ZFHX4Q86UP3 3567 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 SCN5AQ14524 2016 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CHD7Q9P2D1 2997 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CYP3A7-CYP3A51PA0A087WV96 503 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CCDC194A0A1B0GVG4 234 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 A0A1W2PRG0 241 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 RRHO14718 337 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 LINC01565O15544 149 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 TLX3O43711 291 aaPredicted RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 IDH1O75874 414 aaKnown RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 BAIAP3O94812 1187 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 GJB5O95377 273 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CYP3A7P24462 503 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CST5P28325 142 aaPredicted RBP4.16□□□□□ -1.74
CHD8-212ENST00000557329 GRK5P34947 590 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CTNNB1P35222 781 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 STAT1P42224 750 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 STAT6P42226 847 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 SOX2P48431 317 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 PCP4P48539 62 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 OAZ1P54368 228 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 YPEL5P62699 121 aa4.16□□□□□ -1.74
CHD8-212ENST00000557329 CNTN2Q02246 1040 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms