RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TIGD1Q96MW7 591 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM74Q96NL1 305 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 HAPLN3Q96S86 360 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 SEMA3CQ99985 751 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 C1QTNF7Q9BXJ2 289 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 OSBPL1AQ9BXW6 950 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 EDEM3Q9BZQ6 932 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 NDFIP2Q9NV92 336 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 FOXJ2Q9P0K8 574 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 AJAP1Q9UKB5 411 aaPredicted RBP9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 GPR34Q9UPC5 381 aa9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 SPTAN1Q13813 2472 aaKnown RBP9.14□□□□□ -0.95
HNRNPC-227ENST00000556897 SCN8AQ9UQD0 1980 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 FOXN3O00409 490 aaPredicted RBP9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 BIN1O00499 593 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 TOR1BO14657 336 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 PPFIA2O75334 1257 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 RASGRP1O95267 797 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 GSRP00390 522 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 PON1P27169 355 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 HTR1BP28222 390 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 CLCN1P35523 988 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 ETFBP38117 255 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 ETV5P41161 510 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 GEMIN4P57678 1058 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 ZFP36L1Q07352 338 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 PAK1Q13153 545 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 MORC3Q14149 939 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 CLCA4Q14CN2 919 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 LRRC14Q15048 493 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 C2CD6Q53TS8 623 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 KCTD16Q68DU8 428 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 RWDD4Q6NW29 188 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 ENPP7Q6UWV6 458 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 GDPD4Q6W3E5 623 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 GBP6Q6ZN66 633 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 GKN2Q86XP6 184 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 SFTPA2Q8IWL1 248 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 ZSCAN1Q8NBB4 408 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 NETO2Q8NC67 525 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 HTR3CQ8WXA8 447 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 USP7Q93009 1102 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 CFAP57Q96MR6 1250 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 CMKLR1Q99788 373 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 PPARGC1AQ9UBK2 798 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 DNAI1Q9UI46 699 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 OR1A2Q9Y585 309 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 PCDHB11Q9Y5F2 797 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 RNF215Q9Y6U7 377 aa9.13□□□□□ -0.95
HNRNPC-227ENST00000556897 NOTCH2Q04721 2471 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 CXorf51AA0A1B0GTR3 108 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM110-MUSTN1A8MSY1 372 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 C9orf172C9J069 976 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 GOLGA8SH3BPF8 625 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TIMP2P16035 220 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 SCNN1AP37088 669 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 GABRB2P47870 512 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 PEX5P50542 639 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 MAPK10P53779 464 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 SRP54P61011 504 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 ATP11AP98196 1134 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 INPP5AQ14642 412 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 NFATC4Q14934 902 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 EXOC3L4Q17RC7 722 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 WSCD2Q2TBF2 565 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 RAB6CQ53S08 254 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TMPRSS9Q7Z410 1059 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 BNIPLQ7Z465 357 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 SPRED1Q7Z699 444 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 NLRP14Q86W24 1093 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 DTX1Q86Y01 620 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 XYLT1Q86Y38 959 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM35BQ8NCS4 154 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 GPR156Q8NFN8 814 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 OR6C4Q8NGE1 309 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 JPH3Q8WXH2 748 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM159Q96B96 161 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 PDXPQ96GD0 296 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 GDAP1L1Q96MZ0 367 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 FUCA2Q9BTY2 467 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 RAB6CQ9H0N0 254 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 SLC25A18Q9H1K4 315 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 PDCL3Q9H2J4 239 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 GEMIN8Q9NWZ8 242 aaKnown RBP9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 ANKMY1Q9P2S6 941 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 KLQ9UEF7 1012 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 OR12D3Q9UGF7 316 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 TMEM59LQ9UK28 342 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 DNAJC12Q9UKB3 198 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 APPL1Q9UKG1 709 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 HPCAL4Q9UM19 191 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 COQ6Q9Y2Z9 468 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 CHD5Q8TDI0 1954 aa9.12□□□□□ -0.95
HNRNPC-227ENST00000556897 LRRK1Q38SD2 2015 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 A0A1W2PQC6 194 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 FAM72CH0Y354 149 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 BUB1O43683 1085 aa9.11□□□□□ -0.95
HNRNPC-227ENST00000556897 RAMP2O60895 175 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms