RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 MGME1Q9BQP7 344 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 CEP41Q9BYV8 373 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 FZD3Q9NPG1 666 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 TPX2Q9ULW0 747 aaKnown RBP17.25■□□□□ 0.35
PSEN1-217ENST00000556533 CA5BQ9Y2D0 317 aa17.25■□□□□ 0.35
PSEN1-217ENST00000556533 SPAG17Q6Q759 2223 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 UPK3BL1B0FP48 263 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 UPK3BL2E5RIL1 263 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 KCNK3O14649 394 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PPP1R12AO14974 1030 aaPredicted RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 MMP20O60882 483 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PAK4O96013 591 aaPredicted RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PYGMP11217 842 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PECAM1P16284 738 aaPredicted RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 CD38P28907 300 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 CETN2P41208 172 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 NR2C2P49116 596 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PEX5P50542 639 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 FAM193AP78312 1265 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PPIDQ08752 370 aaKnown RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 UGP2Q16851 508 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 KIF19Q2TAC6 998 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 SLC45A4Q5BKX6 768 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 NAPEPLDQ6IQ20 393 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 KIAA1161Q6NSJ0 714 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 ERAP2Q6P179 960 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 BRAT1Q6PJG6 821 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 BZW1Q7L1Q6 419 aaKnown RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 ZC3H18Q86VM9 953 aaKnown RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 ZSWIM9Q86XI8 627 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 MINDY1Q8N5J2 469 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 CXorf40AQ8TE69 158 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 MAML1Q92585 1016 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 ALG3Q92685 438 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 P3H4Q92791 437 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 SKA1Q96BD8 255 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 SLC17A9Q9BYT1 436 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 POLR1EQ9GZS1 481 aaKnown RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 PCDH12Q9NPG4 1184 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 HAUS2Q9NVX0 235 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 DMTF1Q9Y222 760 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 ANKRD6Q9Y2G4 727 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 CAPN6Q9Y6Q1 641 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 NYNRINQ9P2P1 1898 aaKnown RBP17.24■□□□□ 0.35
PSEN1-217ENST00000556533 CHD5Q8TDI0 1954 aa17.24■□□□□ 0.35
PSEN1-217ENST00000556533 NUP205Q92621 2012 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 NUMA1Q14980 2115 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 A8MX80 341 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 C10orf142B7Z368 130 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 PRAMEF26H0Y7S4 382 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 CDX4O14627 284 aaPredicted RBP17.23■□□□□ 0.35
PSEN1-217ENST00000556533 AREL1O15033 823 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 SPINT1O43278 529 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 HLA-DQB2P05538 268 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 CR2P20023 1033 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 SDHBP21912 280 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 TGM2P21980 687 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 AKT2P31751 481 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 NUDT1P36639 197 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 ID4P47928 161 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 GRIA4P48058 902 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 COPS2P61201 443 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 POLR2LP62875 67 aaKnown RBP17.23■□□□□ 0.35
PSEN1-217ENST00000556533 BNC1Q01954 994 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 DSC2Q02487 901 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 ZNF211Q13398 564 aaPredicted RBP17.23■□□□□ 0.35
PSEN1-217ENST00000556533 PPP2R5EQ16537 467 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 TMEM259Q4ZIN3 620 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 AADACL2Q6P093 401 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 FATE1Q969F0 183 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 AGAP3Q96P47 875 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 OLFM3Q96PB7 478 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 OSBPL8Q9BZF1 889 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 ZDHHC5Q9C0B5 715 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 SNX11Q9Y5W9 270 aa17.23■□□□□ 0.35
PSEN1-217ENST00000556533 TSPAN11A1L157 253 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 MIF4GDA9UHW6 222 aaKnown RBP17.22■□□□□ 0.35
PSEN1-217ENST00000556533 SLC30A4O14863 429 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 WNT1P04628 370 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 SUOXP51687 545 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 CLDN2P57739 230 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 ELP6Q0PNE2 266 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 TRAF2Q12933 501 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 ZBTB17Q13105 803 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 HLA-BQ31612 363 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 PRAMEF14Q5SWL7 426 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 BBS12Q6ZW61 710 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 TFB1MQ8WVM0 346 aaKnown RBP17.22■□□□□ 0.35
PSEN1-217ENST00000556533 BRD8Q9H0E9 1235 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 GAREM1Q9H706 876 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 IL21RQ9HBE5 538 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 ATP8A1Q9Y2Q0 1164 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 PCDHB9Q9Y5E1 797 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 RAI2Q9Y5P3 530 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 CFAP54Q96N23 3096 aa17.22■□□□□ 0.35
PSEN1-217ENST00000556533 A0A1W2PR77 199 aa17.21■□□□□ 0.35
PSEN1-217ENST00000556533 DCDC2BA2VCK2 349 aa17.21■□□□□ 0.35
PSEN1-217ENST00000556533 GOLGA8CPA6NN73 597 aa17.21■□□□□ 0.35
PSEN1-217ENST00000556533 H7C0C1 242 aa17.21■□□□□ 0.35
PSEN1-217ENST00000556533 TLR4O00206 839 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms