RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ABCA7Q8IZY2 2146 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CKAP5Q14008 2032 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 KANSL1LA0AUZ9 987 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 GTPBP10A4D1E9 387 aaKnown RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 HHLA1C9JL84 531 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SLC9A3R1O14745 358 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 XPO1O14980 1071 aaKnown RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 PMM2O15305 246 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CHADO15335 359 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 NCAM2O15394 837 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 TEX33O43247 280 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 COCHO43405 550 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 BRINP1O60477 761 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 TLR5O60602 858 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 TSPAN3O60637 253 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 GRAP2O75791 330 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 PRAMEF12O95522 483 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ARSAP15289 507 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 TNFAIP3P21580 790 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 FCARP24071 287 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CSF2RBP32927 897 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 STAT1P42224 750 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 PGFP49763 221 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 RRADP55042 308 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 UBASH3AP57075 661 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SNX16P57768 344 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 PHC1P78364 1004 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 GCNT1Q02742 428 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ADCY2Q08462 1091 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 RUNX3Q13761 415 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 MTF1Q14872 753 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 MYBPC3Q14896 1274 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 BSPRYQ5W0U4 402 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ARHGAP17Q68EM7 881 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 PMF1Q6P1K2 205 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 LCLAT1Q6UWP7 414 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 TPGS1Q6ZTW0 290 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ESPNLQ6ZVH7 1005 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 TADA2BQ86TJ2 420 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SLC47A2Q86VL8 602 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ERICH1Q86X53 443 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ARHGAP18Q8N392 663 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CPA6Q8N4T0 437 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ATL2Q8NHH9 583 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CLEC4CQ8WTT0 213 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 DEPDC1BQ8WUY9 529 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 ERLEC1Q96DZ1 483 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CEP295NLQ96MC4 621 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 STK33Q9BYT3 514 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 UBXN6Q9BZV1 441 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SEMA4AQ9H3S1 761 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 MS4A5Q9H3V2 200 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 NMUR1Q9HB89 426 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CSNK1G1Q9HCP0 422 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SIX2Q9NPC8 291 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SLC2A4RGQ9NR83 387 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 LIMA1Q9UHB6 759 aaKnown RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 MAGEL2Q9UJ55 1249 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 LSM7Q9UK45 103 aaKnown RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 AJAP1Q9UKB5 411 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 SCML2Q9UQR0 700 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 APOBEC2Q9Y235 224 aaKnown RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 INVSQ9Y283 1065 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 MTF2Q9Y483 593 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 PIAS3Q9Y6X2 628 aa4.84□□□□□ -1.63
ATXN3-237ENST00000556274 CUL9Q8IWT3 2517 aa4.84□□□□□ -1.64
ATXN3-237ENST00000556274 FANCMQ8IYD8 2048 aa4.84□□□□□ -1.64
ATXN3-237ENST00000556274 TTC28Q96AY4 2481 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 TRIOO75962 3097 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 YJEFN3A6XGL0 299 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 TMCO5BA8MYB1 307 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 E7ENQ6 273 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 SPECC1L-ADORA2AF8WAN1 911 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 GOLGA8SH3BPF8 625 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 O00370 1275 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 TRDMT1O14717 391 aaKnown RBP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 PRICKLE3O43900 615 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 ULK1O75385 1050 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF888P0CJ79 500 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 SETSIPP0DME0 302 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 UCHL3P15374 230 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF18P17022 549 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 ETV4P43268 484 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 ACADSBP45954 432 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 MEOX1P50221 254 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 CLCN5P51795 746 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 VCPP55072 806 aaKnown RBP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 COG7P83436 770 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 CSTF1Q05048 431 aaKnown RBP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 GRSF1Q12849 480 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 STAT4Q14765 748 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 IQCB1Q15051 598 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 EIF4HQ15056 248 aaKnown RBP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 PDGFRLQ15198 375 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 FRMD7Q6ZUT3 714 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 SCD5Q86SK9 330 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 RASSF3Q86WH2 238 aa4.83□□□□□ -1.64
ATXN3-237ENST00000556274 DDX42Q86XP3 938 aaKnown RBP eCLIP4.83□□□□□ -1.64
ATXN3-237ENST00000556274 DENND1CQ8IV53 801 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms