RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 MMP20O60882 483 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 NEBLO76041 1014 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 XPAP23025 273 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 PCK1P35558 622 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 RPIAP49247 311 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 BLKP51451 505 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 SEMG2Q02383 582 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 LRRC14Q15048 493 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 ASIC2Q16515 512 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 TBC1D25Q3MII6 688 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 C6orf132Q5T0Z8 1188 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 TMCO4Q5TGY1 634 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 ERAP2Q6P179 960 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 LRRC69Q6ZNQ3 347 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 CYP4V2Q6ZWL3 525 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 PHACTR4Q8IZ21 702 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 LZTR1Q8N653 840 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 WDR48Q8TAF3 677 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 IFI44Q8TCB0 444 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 GLMNQ92990 594 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 ECHDC3Q96DC8 303 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 IL12RB2Q99665 862 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 SNRNP25Q9BV90 132 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 SLC13A1Q9BZW2 595 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 DHX35Q9H5Z1 703 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 MRPL47Q9HD33 250 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 GOLGA4Q13439 2230 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-221ENST00000555883 KNTC1P50748 2209 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 J3KR12 359 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 BRINP1O60477 761 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 LRCH4O75427 683 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 TCEA3O75764 348 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 PIGNO95427 931 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 FTLP02792 175 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 C6P13671 934 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ERCC2P18074 760 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 SERPINA4P29622 427 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 EIF4A3P38919 411 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 MMP12P39900 470 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF165P49910 485 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 PAPOLAP51003 745 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ERVPABLB-1P60509 514 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 PPARDQ03181 441 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 IL10RBQ08334 325 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 KLHL30Q0D2K2 578 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 NR0B2Q15466 257 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 LVRNQ6Q4G3 990 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 VPS36Q86VN1 386 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ARHGAP12Q8IWW6 846 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 FSTL5Q8N475 847 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 LMX1AQ8TE12 382 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 NAT6Q93015 286 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 EXOC2Q96KP1 924 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF578Q96N58 590 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF599Q96NL3 588 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 PEBP4Q96S96 227 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 LRRC61Q9BV99 259 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 SLC39A8Q9C0K1 460 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ABCG4Q9H172 646 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ATP13A3Q9H7F0 1226 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 PCDH12Q9NPG4 1184 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 BPTFQ12830 3046 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 ATRXP46100 2492 aa12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 URB1O60287 2271 aaKnown RBP12.81□□□□□ -0.36
HNRNPC-221ENST00000555883 A0A1W2PQ67 120 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 DDX3XO00571 662 aaKnown RBP eCLIP12.8□□□□□ -0.361e-57■■□□□ 12.4
HNRNPC-221ENST00000555883 INSIG1O15503 277 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 DAPK3O43293 454 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 GCATO75600 419 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 PALMO75781 387 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 ALPIP09923 528 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 HTR1BP28222 390 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 MIPP30301 263 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 LSSP48449 732 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 RENBPP51606 427 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 HK3P52790 923 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 POLR2LP62875 67 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 MTM1Q13496 603 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 DPYSQ14117 519 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 IRF4Q15306 451 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 ELOCQ15369 112 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 DPYSL2Q16555 572 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 CA9Q16790 459 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 WSCD2Q2TBF2 565 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 DEFB133Q30KQ1 61 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 PRRT3Q5FWE3 981 aa12.8□□□□□ -0.36
HNRNPC-221ENST00000555883 LRRC73Q5JTD7 316 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms