RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 NEURL1O76050 574 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 RNF8O76064 485 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TMCC1O94876 653 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PLAUP00749 431 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 AFPP02771 609 aaKnown RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TUBBP07437 444 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SRPRAP08240 638 aaKnown RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CD63P08962 238 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 QDPRP09417 244 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SCG2P13521 617 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 WT1P19544 449 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 MAKP20794 623 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 HOXA7P31268 230 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 MCM7P33993 719 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 RYKP34925 604 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PIK3CAP42336 1068 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TNNT2P45379 298 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CAPZA2P47755 286 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 RARRES1P49788 294 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CAMPP49913 170 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 STAT2P52630 851 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PPP5CP53041 499 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PMS2P54278 862 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SIM1P81133 766 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TFAP4Q01664 338 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 IKQ13123 557 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 RUNX2Q13950 521 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SCARB2Q14108 478 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 DRAP1Q14919 205 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 C15orf59Q2T9L4 293 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 COL28A1Q2UY09 1125 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PCGF3Q3KNV8 242 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 LSM12Q3MHD2 195 aaKnown RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CERKLQ49MI3 558 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SYTL3Q4VX76 610 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CXorf66Q5JRM2 361 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ERMARDQ5T6L9 678 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ADALQ6DHV7 355 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 DENND5BQ6ZUT9 1274 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SLFN11Q7Z7L1 901 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 KBTBD6Q86V97 674 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 IGFN1Q86VF2 1251 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TDRPQ86YL5 185 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TMC8Q8IU68 726 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CADM3Q8N126 398 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ARL14EPQ8N8R7 260 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 APPL2Q8NEU8 664 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 KAT2AQ92830 837 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ZKSCAN4Q969J2 545 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ELMOD3Q96FG2 381 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PGAP3Q96FM1 320 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TMEM68Q96MH6 324 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 OR2A14Q96R47 310 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SIN3AQ96ST3 1273 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 TIMP4Q99727 224 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 SRSF8Q9BRL6 282 aaKnown RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF304Q9HCX3 659 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 RANGRFQ9HD47 186 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 MLXIPLQ9NP71 852 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 LTB4R2Q9NPC1 389 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CNOT8Q9UFF9 292 aaKnown RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF112Q9UJU3 913 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 PTRH2Q9Y3E5 179 aaKnown RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 CCL27Q9Y4X3 112 aa3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF644Q9H582 1327 aaPredicted RBP3.12□□□□□ -1.91
MTHFD1-212ENST00000555858 COL4A3Q01955 1670 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 LOC100509620A0A075B734 347 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 A0A096LPK6 155 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 FAM237AA0A1B0GTK4 181 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 hCG_1809904A0A1W2PP81 198 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 A0A1W2PPE2 198 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 A0A1W2PR64 198 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC22A23A1A5C7 686 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TYW5A2RUC4 315 aaKnown RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TARM1B6A8C7 271 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 CTAGE5O15320 804 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PAPSS1O43252 624 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 MTA2O94776 668 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TPPPO94811 219 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 NKX2-2O95096 273 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 GGPS1O95749 300 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 CCDC159P0C7I6 412 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ZNF182P17025 639 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 CTPS1P17812 591 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ITGAXP20702 1163 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PON1P27169 355 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 EPHB2P29323 1055 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 GPR12P47775 334 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 LIG4P49917 911 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PNLIPRP2P54317 469 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 GALCP54803 685 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SLC12A2P55011 1212 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ACSM2AQ08AH3 577 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TMED1Q13445 227 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 BAATQ14032 418 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 PGM5Q15124 567 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 ADIPOQQ15848 244 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 KRT24Q2M2I5 525 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 TCTN1Q2MV58 587 aa3.11□□□□□ -1.91
MTHFD1-212ENST00000555858 SOWAHCQ53LP3 525 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms