RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 GORASP1Q9BQQ3 440 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 LRRC40Q9H9A6 602 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 ETNK1Q9HBU6 452 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 EIF2B3Q9NR50 452 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 PHTF1Q9UMS5 762 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 LOC285095A0A1B0GVY8 99 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 C16orf96A6NNT2 1141 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 NDC80O14777 642 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 TTI1O43156 1089 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 PMPCBO75439 489 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 AP2A1O95782 977 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 TDGF1P13385 188 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 OXTRP30559 389 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 DRD3P35462 400 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 MAGEA6P43360 314 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 GPS1Q13098 491 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 ZNF528Q3MIS6 628 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 AADATQ8N5Z0 425 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 ARRDC3Q96B67 414 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 IFT43Q96FT9 208 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 MRGPRX2Q96LB1 330 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 TRIB3Q96RU7 358 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 OMDQ99983 421 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 MLPHQ9BV36 600 aaPredicted RBP16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 FSD1LQ9BXM9 530 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 FBXL12Q9NXK8 326 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 PPIL1Q9Y3C6 166 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 PCDHB9Q9Y5E1 797 aa16.57■□□□□ 0.24
SPTLC2-203ENST00000554901 E7EVH7 732 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 AXIN1O15169 862 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 NDST3O95803 873 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 CPP00450 1065 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 PRLP01236 227 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 HLA-DPA1P20036 260 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 GRIA4P48058 902 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 TPMTP51580 245 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 TRIP13Q15645 432 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 UGP2Q16851 508 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 GLE1Q53GS7 698 aaKnown RBP16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 NAPEPLDQ6IQ20 393 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 FBXL19Q6PCT2 694 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 RANBP10Q6VN20 620 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 PARS2Q7L3T8 475 aaKnown RBP16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 PRUNE1Q86TP1 453 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 LINC00523Q86TU6 105 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 MAML2Q8IZL2 1156 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 HDDC3Q8N4P3 179 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 PAF1Q8N7H5 531 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 IPMKQ8NFU5 416 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 PDCD6IPQ8WUM4 868 aaKnown RBP16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 ERLEC1Q96DZ1 483 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 SRPK1Q96SB4 655 aaKnown RBP16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 CARD6Q9BX69 1037 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 SLC6A17Q9H1V8 727 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 KDM4CQ9H3R0 1056 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 UBP1Q9NZI7 540 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 ASIC3Q9UHC3 531 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 CACNA1IQ9P0X4 2223 aa16.56■□□□□ 0.24
SPTLC2-203ENST00000554901 UPK3BL1B0FP48 263 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 UPK3BL2E5RIL1 263 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 SMAPO00193 183 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 RAD51CO43502 376 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 AP1G1O43747 822 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 RNASEH2AO75792 299 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 SUN1O94901 812 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ADRB3P13945 408 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 TPSB2P20231 275 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 XPAP23025 273 aaPredicted RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ADRA1AP35348 466 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ADCY8P40145 1251 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 P2RY2P41231 377 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 BASP1P80723 227 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ELP6Q0PNE2 266 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 CNTN1Q12860 1018 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 TPSAB1Q15661 275 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 FAM182AQ5T1J6 154 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 AGBL4Q5VU57 503 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 C8orf74Q6P047 294 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 PCGF5Q86SE9 256 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 TTC7BQ86TV6 843 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 WDR5BQ86VZ2 330 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 GANCQ8TET4 914 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 PIH1D2Q8WWB5 315 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 RAB17Q9H0T7 212 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 SGK2Q9HBY8 427 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ARNT2Q9HBZ2 717 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 CHKBQ9Y259 395 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 A0A1W2PP55 124 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 ANKRD66B4E2M5 251 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 AP3B1O00203 1094 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 FGF1P05230 155 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 APRTP07741 180 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 TIMP2P16035 220 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 VPS41P49754 854 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 METAP1P53582 386 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 EPHB1P54762 984 aa16.55■□□□□ 0.24
SPTLC2-203ENST00000554901 TUBB4BP68371 445 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms