RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 MT-CYBP00156 380 aaPredicted RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 MLNP12872 115 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ATICP31939 592 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 RPS3AP61247 264 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 TOP1MTQ969P6 601 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 VPS39Q96JC1 886 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 UTP6Q9NYH9 597 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZCWPW2A0A1B0GU75 182 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 TRIM64A6NGJ6 449 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 DPYSL4O14531 572 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 NRP1O14786 923 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 AURKAO14965 403 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 TRIM24O15164 1050 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 SNAP91O60641 907 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 CYP2C8P10632 490 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ERCC2P18074 760 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 NFKB1P19838 968 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 GNL1P36915 607 aaPredicted RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 PSMD8P48556 350 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 NFATC3Q12968 1075 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 PRKAA1Q13131 559 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 NOMO2Q5JPE7 1267 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 GALNT18Q6P9A2 607 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 KCNMB4Q86W47 210 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 CANT1Q8WVQ1 401 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 RPL10LQ96L21 214 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 TCF12Q99081 682 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 MRPL40Q9NQ50 206 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 RUVBL2Q9Y230 463 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 KRBA1A5PL33 1030 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 JCHAINP01591 159 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 SBK3P0C264 359 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 TGFB3P10600 412 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.329e-9■□□□□ 9.1
PPP4R3A-202ENST00000554390 SPRP35270 261 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 USP10Q14694 798 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 NEDD8Q15843 81 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 TRIM16LQ309B1 348 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 ARHGAP36Q6ZRI8 547 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 KCTD8Q6ZWB6 473 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 CLEC14AQ86T13 490 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLC7A5P1Q8MH63 180 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 ISL2Q96A47 359 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 TAMM41Q96BW9 452 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 MUC3BQ9H195 1237 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 TNFRSF12AQ9NP84 129 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 FZD10Q9ULW2 581 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 TRIM64BA6NI03 449 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 EEF2KO00418 725 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 BMP2P12643 396 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 PTPN3P26045 913 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 MAP4P27816 1152 aaKnown RBP17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 MAP3K7CLP57077 242 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 SOX4Q06945 474 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 MERTKQ12866 999 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 KCTD2Q14681 263 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 PPP1R3AQ16821 1122 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 NANOGNBQ7Z5D8 188 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZNF354CQ86Y25 554 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 TERB1Q8NA31 727 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 MLPHQ9BV36 600 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 ATAD3AQ9NVI7 634 aa17.06■□□□□ 0.32
PPP4R3A-202ENST00000554390 CCL22O00626 93 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 LSM1O15116 133 aaKnown RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 CD68P34810 354 aaPredicted RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 LIMK2P53671 638 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 POU5F1BQ06416 359 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 TRAP1Q12931 704 aaKnown RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 LIPMQ5VYY2 423 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 LRRC8EQ6NSJ5 796 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 CHST15Q7LFX5 561 aaPredicted RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 PLPPR4Q7Z2D5 763 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 OR9I1Q8NGQ6 314 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 DUS3LQ96G46 650 aaKnown RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 CAMKK2Q96RR4 588 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 IL1RL2Q9HB29 575 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 SPON1Q9HCB6 807 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 RIC8BQ9NVN3 520 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 VTI1BQ9UEU0 232 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 RBMX2Q9Y388 322 aaKnown RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLC30A1Q9Y6M5 507 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 DYNC1LI2O43237 492 aaPredicted RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 RECQL4O94761 1208 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 C6orf10Q5SRN2 563 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLC26A9Q7LBE3 791 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 IGFN1Q86VF2 1251 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 MFSD2AQ8NA29 543 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 DCPSQ96C86 337 aaKnown RBP17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 FBXL20Q96IG2 436 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 XPR1Q9UBH6 696 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLC2A6Q9UGQ3 507 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 ADAM28Q9UKQ2 775 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 SSC5DA1L4H1 1573 aa17.05■□□□□ 0.32
PPP4R3A-202ENST00000554390 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms