RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.35■□□□□ 0.37
ITGA5-213ENST00000553071 PRPF39Q86UA1 669 aaKnown RBP17.35■□□□□ 0.37
ITGA5-213ENST00000553071 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.35■□□□□ 0.37
ITGA5-213ENST00000553071 PDCD6IPQ8WUM4 868 aaKnown RBP17.35■□□□□ 0.37
ITGA5-213ENST00000553071 NELL1Q92832 810 aa17.35■□□□□ 0.37
ITGA5-213ENST00000553071 ERLEC1Q96DZ1 483 aa17.35■□□□□ 0.37
ITGA5-213ENST00000553071 FSD1LQ9BXM9 530 aa17.35■□□□□ 0.37
ITGA5-213ENST00000553071 TDRD1Q9BXT4 1180 aaKnown RBP17.35■□□□□ 0.37
ITGA5-213ENST00000553071 DDX47Q9H0S4 455 aaKnown RBP17.35■□□□□ 0.37
ITGA5-213ENST00000553071 PCDHB9Q9Y5E1 797 aa17.35■□□□□ 0.37
ITGA5-213ENST00000553071 PCDHGA2Q9Y5H1 932 aa17.35■□□□□ 0.37
ITGA5-213ENST00000553071 A0A1W2PP55 124 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CTAGE15A4D2H0 777 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 LRRC72A6NJI9 287 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 AP3B1O00203 1094 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 AP1G1O43747 822 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 KRT14P02533 472 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 MMP2P08253 660 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 SP9P0CG40 484 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CTAGE8P0CG41 777 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 ADRB3P13945 408 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CD6P30203 668 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 P2RY2P41231 377 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CDK16Q00536 496 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 DR1Q01658 176 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CNTN1Q12860 1018 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 SPDYCQ5MJ68 293 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 TTC27Q6P3X3 843 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 ZC3H14Q6PJT7 736 aaKnown RBP17.34■□□□□ 0.37
ITGA5-213ENST00000553071 LINC00523Q86TU6 105 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CTAGE6Q86UF2 777 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CTAGE4Q8IX94 777 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 KLHL7Q8IXQ5 586 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 SHROOM3Q8TF72 1996 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 FAM131CQ96AQ9 280 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 FEM1CQ96JP0 617 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 SLC6A17Q9H1V8 727 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 NEUROG2Q9H2A3 272 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 LRRC40Q9H9A6 602 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 PPIL1Q9Y3C6 166 aa17.34■□□□□ 0.37
ITGA5-213ENST00000553071 CACNA1IQ9P0X4 2223 aa17.33■□□□□ 0.37
ITGA5-213ENST00000553071 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 TTC24A2A3L6 582 aaPredicted RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 UPK3BL1B0FP48 263 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 UPK3BL2E5RIL1 263 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 NEMP1O14524 444 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 MAP3K13O43283 966 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 TSPAN6O43657 245 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 FZD6O60353 706 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 NDUFS2O75306 463 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 PMPCBO75439 489 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 NDST3O95803 873 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 MT-CYBP00156 380 aaPredicted RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 CPP00450 1065 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 TIMP2P16035 220 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 HLA-DPA1P20036 260 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 PSMB4P28070 264 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 RPL22P35268 128 aaKnown RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 DRD3P35462 400 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 PXNP49023 591 aaPredicted RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 LMAN1P49257 510 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 FNTBP49356 437 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 WNT3AP56704 352 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 SARNPP82979 210 aaKnown RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 TRAF2Q12933 501 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 NAPEPLDQ6IQ20 393 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 TSSK4Q6SA08 328 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 USP45Q70EL2 814 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 PCGF5Q86SE9 256 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 KLHDC8BQ8IXV7 354 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 AADATQ8N5Z0 425 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 SPATA22Q8NHS9 363 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 ARRDC3Q96B67 414 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 SCRN2Q96FV2 425 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 TPSD1Q9BZJ3 242 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 PREBQ9HCU5 417 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.36
ITGA5-213ENST00000553071 WSB2Q9NYS7 404 aaPredicted RBP17.33■□□□□ 0.36
ITGA5-213ENST00000553071 LOC285095A0A1B0GVY8 99 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 FAM187AA6NFU0 413 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 ANKRD66B4E2M5 251 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 PLRG1O43660 514 aaKnown RBP17.32■□□□□ 0.36
ITGA5-213ENST00000553071 METTL18O95568 372 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 CYP2A6P11509 494 aaPredicted RBP17.32■□□□□ 0.36
ITGA5-213ENST00000553071 NUDT1P36639 197 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 GRIA4P48058 902 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 SEMA5AQ13591 1074 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 MAP7D1Q3KQU3 841 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 POM121L1PQ3SYA9 428 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 KDELC1Q6UW63 502 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 PARS2Q7L3T8 475 aaKnown RBP17.32■□□□□ 0.36
ITGA5-213ENST00000553071 CACUL1Q86Y37 369 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 ZBTB44Q8NCP5 570 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 CADM4Q8NFZ8 388 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 OR2T34Q8NGX1 318 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 OR14C36Q8NHC7 312 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 GAB3Q8WWW8 586 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 VOPP1Q96AW1 172 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 RMDN1Q96DB5 314 aa17.32■□□□□ 0.36
ITGA5-213ENST00000553071 OXNAD1Q96HP4 312 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms