RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ALCAMQ13740 583 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CKAP5Q14008 2032 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 HLTFQ14527 1009 aaKnown RBP eCLIP5.27□□□□□ -1.57
CKAP4-203ENST00000553039 TESK1Q15569 626 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 BMP2KLQ5H9B9 411 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 ZNF667Q5HYK9 610 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PITRM1Q5JRX3 1037 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 EFHC2Q5JST6 749 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 AGBL4Q5VU57 503 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 OR6B2Q6IFH4 312 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 KIAA1161Q6NSJ0 714 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 GCNT7Q6ZNI0 430 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 OTOGQ6ZRI0 2925 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 NRSN1Q8IZ57 195 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CARNMT1Q8N4J0 409 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 AFAP1L2Q8N4X5 818 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 HJURPQ8NCD3 748 aaPredicted RBP5.27□□□□□ -1.57
CKAP4-203ENST00000553039 TMIEQ8NEW7 156 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 SPATA3Q8NHX4 192 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 RPL10LQ96L21 214 aaKnown RBP5.27□□□□□ -1.57
CKAP4-203ENST00000553039 CCDC114Q96M63 670 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 DPYSL5Q9BPU6 564 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 SEMA6CQ9H3T2 930 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PCIF1Q9H4Z3 704 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 KLF15Q9UIH9 416 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PILRAQ9UKJ1 303 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 NME7Q9Y5B8 376 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 PCDHGC4Q9Y5F7 938 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 KIF26BQ2KJY2 2108 aa5.27□□□□□ -1.57
CKAP4-203ENST00000553039 TTC24A2A3L6 582 aaPredicted RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 B2RBV5 119 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 B4E171 279 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 HHLA1C9JL84 531 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 EIF3DO15371 548 aaKnown RBP eCLIP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 TSPAN6O43657 245 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 DUX1O43812 170 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 CTDNEP1O95476 244 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 DLATP10515 647 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 CCDC130P13994 396 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 BPIP17213 487 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 NFKB1P19838 968 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 NR1D1P20393 614 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ARNTP27540 789 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ADORA2BP29275 332 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 OAS2P29728 719 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 GNALP38405 381 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 TSPAN7P41732 249 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 AP3M2P53677 418 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 TAS2R38P59533 333 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 MYL6P60660 151 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 YWHAGP61981 247 aaKnown RBP eCLIP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 GPLD1P80108 840 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 EIF2B5Q13144 721 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ZRSR2Q15696 482 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 SGSM1Q2NKQ1 1148 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 EDRF1Q3B7T1 1238 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 C14orf28Q4W4Y0 310 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 L1TD1Q5T7N2 865 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 OGFOD3Q6PK18 319 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 CLEC20AQ6ZU45 233 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 STXBP4Q6ZWJ1 553 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ERN2Q76MJ5 926 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 TAOK1Q7L7X3 1001 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 APLFQ8IW19 511 aaPredicted RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 SULF2Q8IWU5 870 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 PHACTR4Q8IZ21 702 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 CYP4X1Q8N118 509 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ATL2Q8NHH9 583 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ASB12Q8WXK4 309 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 STARD8Q92502 1023 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 SEC14L1Q92503 715 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ERCC4Q92889 916 aaPredicted RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 KISS1RQ969F8 398 aaPredicted RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 JAKMIP2Q96AA8 810 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 PPP1R16AQ96I34 528 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 C8orf76Q96K31 380 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 LMLNQ96KR4 655 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 AK8Q96MA6 479 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 FIZ1Q96SL8 496 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 SLC25A23Q9BV35 468 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 HDAC8Q9BY41 377 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 DUSP16Q9BY84 665 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 FZD3Q9NPG1 666 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 GPR27Q9NS67 375 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 INTS7Q9NVH2 962 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 LRIT1Q9P2V4 623 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 KCND3Q9UK17 655 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 INTS6Q9UL03 887 aaKnown RBP5.26□□□□□ -1.57
CKAP4-203ENST00000553039 SARDHQ9UL12 918 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 NAALADL1Q9UQQ1 740 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 ZNF451Q9Y4E5 1061 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 B3GALT1Q9Y5Z6 326 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 RP1P56715 2156 aa5.26□□□□□ -1.57
CKAP4-203ENST00000553039 LOC101059948A0A1B0GTJ6 334 aa5.25□□□□□ -1.57
CKAP4-203ENST00000553039 A0A1B0GUH1 482 aa5.25□□□□□ -1.57
CKAP4-203ENST00000553039 PIPSLA2A3N6 862 aa5.25□□□□□ -1.57
CKAP4-203ENST00000553039 KPNA3O00505 521 aaPredicted RBP5.25□□□□□ -1.57
CKAP4-203ENST00000553039 CASC3O15234 703 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms