RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZNF644Q9H582 1327 aaPredicted RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 LOC102723996A0A087X1L8 192 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 A0A1B0GVM2 712 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 URADA6NGE7 173 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 H0Y626 953 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 CLGNO14967 610 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC25A12O75746 678 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 NKX2-2O95096 273 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 WNT1P04628 370 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SRPRAP08240 638 aaKnown RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 CHRNA5P30532 468 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 HOXA7P31268 230 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SHMT1P34896 483 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 PTGER1P34995 402 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 CAPZA2P47755 286 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 LIG4P49917 911 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 RBP5P82980 135 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 GRIK3Q13003 919 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 IKQ13123 557 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SNTB1Q13884 538 aaKnown RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 COG2Q14746 738 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 DRAP1Q14919 205 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF169Q14929 603 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 KRT24Q2M2I5 525 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 C15orf59Q2T9L4 293 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SYTL3Q4VX76 610 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 FNDC7Q5VTL7 733 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 LRCH2Q5VUJ6 765 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC2A7Q6PXP3 512 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SEPT14Q6ZU15 432 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 CCDC186Q7Z3E2 898 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 TBC1D26Q86UD7 250 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 TDRPQ86YL5 185 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 UEVLDQ8IX04 471 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 KIAA2013Q8IYS2 634 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 RNF168Q8IYW5 571 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 ARL14EPQ8N8R7 260 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SNAPC3Q92966 411 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF622Q969S3 477 aaKnown RBP eCLIP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 RMDN1Q96DB5 314 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 TMEM68Q96MH6 324 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 DGAT2Q96PD7 388 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 SEPT5Q99719 369 aaPredicted RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 PLK3Q9H4B4 646 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 GRPEL1Q9HAV7 217 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 XAB2Q9HCS7 855 aaKnown RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 ARL8BQ9NVJ2 186 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 GTF3C4Q9UKN8 822 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 EXO1Q9UQ84 846 aaKnown RBP4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 CARD8Q9Y2G2 431 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 FAM96BQ9Y3D0 163 aa4.2□□□□□ -1.74
LSM6P2-201ENST00000552208 CYP2D7A0A087X1C5 515 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 TRBV5-7A0A0A0MS05 114 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 A0A0G2JLL6 359 aaPredicted RBP4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 TCRBV21S2A2A0A5A6 115 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 MSI1O43347 362 aaKnown RBP4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 KLK8O60259 260 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 GCATO75600 419 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 NEURL1O76050 574 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 GGPS1O95749 300 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 MYBL1P10243 752 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 KRT10P13645 584 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 TMEM11P17152 192 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 SRD5A1P18405 259 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 AGAP20933 346 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 CPT2P23786 658 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 YWHAQP27348 245 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 ACADLP28330 430 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 TNNT3P45378 269 aaPredicted RBP4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 CXCR3P49682 368 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 SUOXP51687 545 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 CLCN3P51790 818 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 GALCP54803 685 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 DGCR2P98153 550 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 PLIN5Q00G26 463 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 ALCAMQ13740 583 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 PGM5Q15124 567 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 SGO1Q5FBB7 561 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 KRT80Q6KB66 452 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 CEP85Q6P2H3 762 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 TSPAN33Q86UF1 283 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 AACSQ86V21 672 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 RASAL3Q86YV0 1011 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 PALM2Q8IXS6 379 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 THNSL1Q8IYQ7 743 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 LCORLQ8N3X6 602 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 ZBTB8BQ8NAP8 495 aaPredicted RBP4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 CHST13Q8NET6 341 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 AFAP1L1Q8TED9 768 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 PTPMT1Q8WUK0 201 aaPredicted RBP4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF503Q96F45 646 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 CEP295NLQ96MC4 621 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 C8orf49Q96NF6 230 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 BBS4Q96RK4 519 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 PAFAH2Q99487 392 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 GPATCH1Q9BRR8 931 aaKnown RBP4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 KIFC3Q9BVG8 833 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 C1QTNF3Q9BXJ4 246 aa4.19□□□□□ -1.74
LSM6P2-201ENST00000552208 HRH4Q9H3N8 390 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms