RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SCML4Q8N228 414 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 TTC39CQ8N584 583 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 C9orf43Q8TAL5 461 aaPredicted RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 GRIN3AQ8TCU5 1115 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CLEC4CQ8WTT0 213 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SEMA4DQ92854 862 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 USP7Q93009 1102 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 MIB2Q96AX9 1013 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SLC39A13Q96H72 371 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 TMEM74Q96NL1 305 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SERPINB11Q96P15 392 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 UCN2Q96RP3 112 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 USP28Q96RU2 1077 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 LRRC61Q9BV99 259 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SLC17A9Q9BYT1 436 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CPEB1Q9BZB8 566 aaKnown RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CUEDC2Q9H467 287 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 DYRK4Q9NR20 520 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SIRPGQ9P1W8 387 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 APOBEC3BQ9UH17 382 aaKnown RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 FRMD4BQ9Y2L6 1034 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 JMJD1CQ15652 2540 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ABCA4P78363 2273 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 DCHS2Q6V1P9 2916 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 TNRC6AQ8NDV7 1962 aaKnown RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 A0A1W2PQC6 194 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 A1L4Q6 167 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 F5H5T6 163 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 O00370 1275 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 PDXKO00764 312 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 FPGTO14772 594 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 YY2O15391 372 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 SNAP91O60641 907 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 MT-CO1P00395 513 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 APOEP02649 317 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 PRNPP04156 253 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 SETSIPP0DME0 302 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 TSHRP16473 764 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 CCKBRP32239 447 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 UQCRFS1P47985 274 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 PLK1P53350 603 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 RPS21P63220 83 aaKnown RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 STK4Q13043 487 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 SGCGQ13326 291 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 CUL4BQ13620 913 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 RABEP1Q15276 862 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 FAXCQ5TGI0 409 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 CXorf57Q6NSI4 855 aaKnown RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 PMF1Q6P1K2 205 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 ATCAYQ86WG3 371 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 GRAMD1CQ8IYS0 662 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 SH2D3CQ8N5H7 860 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 Q8N9G6 341 aaPredicted RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 IQUBQ8NA54 791 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 KYQ8NBH2 561 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 CHST14Q8NCH0 376 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 KIAA0895Q8NCT3 520 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 OR52K2Q8NGK3 314 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 PCDH19Q8TAB3 1148 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 SPATA20Q8TB22 786 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 BTN2A2Q8WVV5 523 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 SREK1Q8WXA9 508 aaKnown RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 KCTD13Q8WZ19 329 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 IRGQQ8WZA9 623 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 RNF34Q969K3 372 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 FAM149B1Q96BN6 582 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 ALG14Q96F25 216 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 EEF2KMTQ96G04 330 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 FEM1CQ96JP0 617 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 KLF6Q99612 283 aaPredicted RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 FEM1AQ9BSK4 669 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 CLPBQ9H078 707 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 KCTD10Q9H3F6 313 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 LRRN3Q9H3W5 708 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 TMEM8AQ9HCN3 771 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 TUBD1Q9UJT1 453 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 VPS28Q9UK41 221 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 PNMA8BQ9ULN7 279 aaPredicted RBP5.47□□□□□ -1.53
HOXB3-213ENST00000552000 NAALADL1Q9UQQ1 740 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 TLR6Q9Y2C9 796 aa5.47□□□□□ -1.53
HOXB3-213ENST00000552000 LRP4O75096 1905 aa5.46□□□□□ -1.53
HOXB3-213ENST00000552000 PVALEFA0A1B0GWK0 134 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 TCAF2A6NFQ2 919 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 IGLON5A6NGN9 336 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 K7ERQ8 282 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 M0QYV0 167 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 NKX2-8O15522 239 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SMAD6O43541 496 aaKnown RBP5.46□□□□□ -1.54
HOXB3-213ENST00000552000 DUX1O43812 170 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 KLRC4O43908 158 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 MAP3K6O95382 1288 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 FYNP06241 537 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 KRT7P08729 469 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 RNF224P0DH78 156 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 PRKAR1AP10644 381 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 SRCP12931 536 aa5.46□□□□□ -1.54
HOXB3-213ENST00000552000 KRT13P13646 458 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms