RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 MAXP61244 160 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 SULT2A1Q06520 285 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 FAM83EQ2M2I3 478 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 KIAA0930Q6ICG6 404 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-219ENST00000551544 ZFP1Q6P2D0 407 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 RANBP10Q6VN20 620 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-219ENST00000551544 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 KLHL32Q96NJ5 620 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 PKP2Q99959 881 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
CACNB3-219ENST00000551544 AGO3Q9H9G7 860 aaKnown RBP13.14□□□□□ -0.31
CACNB3-219ENST00000551544 TRPC7Q9HCX4 862 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 ABCC13Q9NSE7 274 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
CACNB3-219ENST00000551544 RIMS3Q9UJD0 308 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 PCDHGB4Q9UN71 923 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 GIT1Q9Y2X7 761 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 PCDHGB5Q9Y5G0 923 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
CACNB3-219ENST00000551544 E9PAM4 449 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 F8W810 466 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 MT-CO1P00395 513 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 CHRNA1P02708 482 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 CCDC166P0CW27 439 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 HDCP19113 662 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 DNAJB1P25685 340 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 KPNA2P52292 529 aaKnown RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 PPP1R3AQ16821 1122 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 SPRYD7Q5W111 196 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 TFAP2DQ7Z6R9 452 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 ZNF513Q8N8E2 541 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 UBAP1Q9NZ09 502 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 BPTFQ12830 3046 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 TTC24A2A3L6 582 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 BCAS2O75934 225 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 CRTAMO95727 393 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 C1QTNF8P60827 252 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 TIGD7Q6NT04 549 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 ZNF354CQ86Y25 554 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 SCN4BQ8IWT1 228 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 SPPL2BQ8TCT7 592 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 MAELQ96JY0 434 aaKnown RBP13.13□□□□□ -0.31
CACNB3-219ENST00000551544 Q9H521 79 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 NT5MQ9NPB1 228 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 CCDC167Q9P0B6 97 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 HS3ST4Q9Y661 456 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 AP4B1Q9Y6B7 739 aa13.13□□□□□ -0.31
CACNB3-219ENST00000551544 A8MT66 165 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 OR6B1O95007 311 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 ITGB1P05556 798 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 TSPAN8P19075 237 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 HOXC8P31273 242 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PSME3P61289 254 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 EIF4EBP2Q13542 120 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 GK3PQ14409 553 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 AGKQ53H12 422 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 TECRLQ5HYJ1 363 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 GNASQ5JWF2 1037 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 AGAP9Q5VTM2 703 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 CUZD1Q86UP6 607 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 SPATA2LQ8IUW3 424 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 TRIM62Q9BVG3 475 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PCDHAC1Q9H158 963 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 NMUR1Q9HB89 426 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 MRM3Q9HC36 420 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 APPL1Q9UKG1 709 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 DENRO43583 198 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PYGLP06737 847 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 HOXC13P31276 330 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 CD86P42081 329 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 DNAJB13P59910 316 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 MAP7Q14244 749 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 C6orf52Q5T4I8 152 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 KLC3Q6P597 504 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 RTL3Q8N8U3 475 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 OR6P1Q8NGX9 317 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PABPC5Q96DU9 382 aaKnown RBP13.12□□□□□ -0.31
CACNB3-219ENST00000551544 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 SMOC2Q9H3U7 446 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 TBC1D13Q9NVG8 400 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 TTC3P53804 2025 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 HEATR9A2RTY3 570 aa13.12□□□□□ -0.31
CACNB3-219ENST00000551544 E7ENX8 843 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms