RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RARS2Q5T160 578 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 CERCAMQ5T4B2 595 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TMTC4Q5T4D3 741 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ATPAF1Q5TC12 328 aaPredicted RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 RAP1GAP2Q684P5 730 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SP5Q6BEB4 398 aaPredicted RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 FCRL6Q6DN72 434 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 RGS7BPQ6MZT1 257 aaPredicted RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 ZNF585AQ6P3V2 769 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 KLHL17Q6TDP4 642 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 LCNL1Q6ZST4 164 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 KCTD20Q7Z5Y7 419 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ZNF410Q86VK4 478 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TTC30AQ86WT1 665 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 RAB11FIP4Q86YS3 637 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TMPRSS6Q8IU80 811 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CCDC28AQ8IWP9 274 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SLC15A3Q8IY34 581 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 THNSL1Q8IYQ7 743 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 KIAA2013Q8IYS2 634 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 LRRC43Q8N309 656 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.56□□□□□ -2
CPSF6-207ENST00000551516 Q8NA96 180 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 NCOA7Q8NI08 942 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ABHD5Q8WTS1 349 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 STYXQ8WUJ0 223 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 GLG1Q92896 1179 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 FGF13Q92913 245 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TMEM125Q96AQ2 219 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 GRAMD1AQ96CP6 724 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 RNF31Q96EP0 1072 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 RRP36Q96EU6 259 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 B3GALT6Q96L58 329 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TCEANC2Q96MN5 208 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 MTMR9Q96QG7 549 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 OSBPL9Q96SU4 736 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 RBM15Q96T37 977 aaKnown RBP eCLIP2.56□□□□□ -23e-8■■■□□ 18.7
CPSF6-207ENST00000551516 RTP3Q9BQQ7 232 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TMEM175Q9BSA9 504 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 FAM167BQ9BTA0 163 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 BDH2Q9BUT1 245 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 HERC2P3Q9BVR0 1158 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SORBS1Q9BX66 1292 aaKnown RBP2.56□□□□□ -2
CPSF6-207ENST00000551516 TMEM120AQ9BXJ8 343 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 NFKBIZQ9BYH8 718 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ALOXE3Q9BYJ1 711 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 LRRC2Q9BYS8 371 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TRIM5Q9C035 493 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 MAGEH1Q9H213 219 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SLC25A32Q9H2D1 315 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 SFXN1Q9H9B4 322 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 GALNT9Q9HCQ5 603 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CD248Q9HCU0 757 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 LTB4R2Q9NPC1 389 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ZNF302Q9NR11 478 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ZDHHC7Q9NXF8 308 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 FBXW11Q9UKB1 542 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CA14Q9ULX7 337 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 HES2Q9Y543 173 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 PCDHB2Q9Y5E7 798 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 CLUHO75153 1309 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 ZMYM2Q9UBW7 1377 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 LAMA4Q16363 1823 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 NLRC5Q86WI3 1866 aa2.56□□□□□ -2
CPSF6-207ENST00000551516 TRGV11A0A075B6L2 103 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 KANSL1LA0AUZ9 987 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CCDC78A2IDD5 438 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ARL5CA6NH57 179 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 AHRRA9YTQ3 701 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 HMGB1P1B2RPK0 211 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 TMEM189-UBE2V1I3L0A0 370 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 HIP1O00291 1037 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ACKR2O00590 384 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TRIM38O00635 465 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FCHO1O14526 889 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CDX4O14627 284 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 MUSKO15146 869 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CD3EAPO15446 510 aaKnown RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 ZSCAN9O15535 394 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 B4GALT5O43286 388 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FAM189A1O60320 539 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TSPAN1O60635 241 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 SNX2O60749 519 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 FAM20BO75063 409 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 NCR1O76036 304 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CDKL5O76039 1030 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 USP1O94782 785 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 SLITRK3O94933 977 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 SEC24AO95486 1093 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 TDP2O95551 362 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 VIPP01282 170 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ITGA5P08648 1049 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CPA1P15085 419 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 CD19P15391 556 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 PECAM1P16284 738 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 NPPBP16860 134 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 IFNAR1P17181 557 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 ARF4P18085 180 aaPredicted RBP2.55□□□□□ -2
CPSF6-207ENST00000551516 CD72P21854 359 aa2.55□□□□□ -2
CPSF6-207ENST00000551516 GLRA2P23416 452 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms