RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CCNG2Q16589 344 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 SUPT20HL1Q3ZLR7 823 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 ZNF793Q6ZN11 406 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 GPAT4Q86UL3 456 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 CNGA4Q8IV77 575 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 CADM3Q8N126 398 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 KDM1BQ8NB78 822 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 CADM4Q8NFZ8 388 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 NEK9Q8TD19 979 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 DDB2Q92466 427 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 USP6NLQ92738 828 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 PERPQ96FX8 193 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 TIGD1Q96MW7 591 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 H2AFJQ9BTM1 129 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 TMX4Q9H1E5 349 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-205ENST00000550592 WDR6Q9NNW5 1121 aaKnown RBP5.15□□□□□ -1.59
LIMA1-205ENST00000550592 PLEKHB1Q9UF11 243 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-205ENST00000550592 ITSN2Q9NZM3 1697 aa5.15□□□□□ -1.59
LIMA1-205ENST00000550592 BCL9LQ86UU0 1499 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 ATP7AQ04656 1500 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 A0A096LPK6 155 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 CGB1A6NKQ9 187 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 K7ENM7 598 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MASP2O00187 686 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 ATG13O75143 517 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 GFPT2O94808 682 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MLYCDO95822 493 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 IRF1P10914 325 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 POU1F1P28069 291 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 TNFSF8P32971 234 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MLH1P40692 756 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 GPR12P47775 334 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 RNPS1Q15287 305 aaKnown RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MEA1Q16626 185 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 HIST2H2ACQ16777 129 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 C6orf10Q5SRN2 563 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 NCAPH2Q6IBW4 605 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 CPLX2Q6PUV4 134 aaKnown RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 KLHL24Q6TFL4 600 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MCPH1Q8NEM0 835 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 ATOH1Q92858 354 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 LRRC59Q96AG4 307 aaKnown RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 COQ8BQ96D53 544 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 ZNF333Q96JL9 665 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MAP7D2Q96T17 732 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 GHITMQ9H3K2 345 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 SPATS2LQ9NUQ6 558 aaKnown RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 MSRB1Q9NZV6 116 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 LIMA1Q9UHB6 759 aaKnown RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 SLCO3A1Q9UIG8 710 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 INTS6Q9UL03 887 aaKnown RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 RAP2CQ9Y3L5 183 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-205ENST00000550592 LYVE1Q9Y5Y7 322 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 KCNE2Q9Y6J6 123 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 CAPN7Q9Y6W3 813 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 CTTNBP2Q8WZ74 1663 aa5.14□□□□□ -1.59
LIMA1-205ENST00000550592 ARHGAP5Q13017 1502 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 TTC36A6NLP5 189 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 LRRC53A6NM62 1247 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 KCNU1A8MYU2 1149 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 ZNF814B7Z6K7 855 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 SLC25A17O43808 307 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 SEC31AO94979 1220 aaKnown RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 MYZAPP0CAP1 466 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 CTPS1P17812 591 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 KELP23276 732 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 HOXD13P35453 343 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 CLDN2P57739 230 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 INHBEP58166 350 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 OLR1P78380 273 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 FOXD4Q12950 439 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 VEPH1Q14D04 833 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 TRIP6Q15654 476 aaKnown RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 HMBOX1Q6NT76 420 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 TBC1D26Q86UD7 250 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 ANKRD13BQ86YJ7 626 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 NME8Q8N427 588 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 LRRC57Q8N9N7 239 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 RASSF8Q8NHQ8 419 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 NTN5Q8WTR8 489 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 FAM149B1Q96BN6 582 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 INTS12Q96CB8 462 aaKnown RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 SDF4Q9BRK5 362 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 STRA6Q9BX79 667 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 B3GNT4Q9C0J1 378 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 PLEKHA4Q9H4M7 779 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 EIF2B3Q9NR50 452 aaKnown RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 SEPT11Q9NVA2 429 aaKnown RBP5.13□□□□□ -1.59
LIMA1-205ENST00000550592 HCFC1R1Q9NWW0 138 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 SLC45A1Q9Y2W3 748 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 ZMYM2Q9UBW7 1377 aa5.13□□□□□ -1.59
LIMA1-205ENST00000550592 KIF14Q15058 1648 aa5.12□□□□□ -1.59
LIMA1-205ENST00000550592 MYO5CQ9NQX4 1742 aa5.12□□□□□ -1.59
LIMA1-205ENST00000550592 A6NCN8 305 aa5.12□□□□□ -1.59
LIMA1-205ENST00000550592 LIPT2A6NK58 231 aa5.12□□□□□ -1.59
LIMA1-205ENST00000550592 A6NNC1 897 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms