RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 OPTNQ96CV9 577 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 ERO1AQ96HE7 468 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 WDFY2Q96P53 400 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 MAK16Q9BXY0 300 aaKnown RBP6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 KAT14Q9H8E8 782 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 SUCLA2Q9P2R7 463 aaPredicted RBP6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 PEMTQ9UBM1 199 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 DKK2Q9UBU2 259 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 CDH22Q9UJ99 828 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 ALPK3Q96L96 1907 aa6.46□□□□□ -1.37
TGFBR1-208ENST00000550253 MGAMO43451 1857 aa6.46□□□□□ -1.38
TGFBR1-208ENST00000550253 CDH23Q9H251 3354 aa6.46□□□□□ -1.38
TGFBR1-208ENST00000550253 A0A1W2PQF6 199 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CES2O00748 559 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 ENTPD3O75355 529 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CSPG5O95196 566 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 C1RP00736 705 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 OAS2P29728 719 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TTKP33981 857 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CTNNA1P35221 906 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 GAB1Q13480 694 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SCARB2Q14108 478 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 VGLL4Q14135 290 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 IL13RA2Q14627 380 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 RRP1BQ14684 758 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 WDR43Q15061 677 aaKnown RBP eCLIP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 EPHA10Q5JZY3 1008 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TCERG1LQ5VWI1 586 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 C15orf52Q6ZUT6 534 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 DENND5BQ6ZUT9 1274 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 GALNTL5Q7Z4T8 443 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 ADGRF3Q8IZF5 1079 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 VPS52Q8N1B4 723 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 EDC3Q96F86 508 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 LOXL4Q96JB6 756 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SNX18Q96RF0 628 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TMEM39BQ9GZU3 492 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 NDST4Q9H3R1 872 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 IL1RAPL1Q9NZN1 696 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CAPN7Q9Y6W3 813 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 FAM169AQ9Y6X4 670 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 WDR27A2RRH5 827 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TP73O15350 636 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SUV39H1O43463 412 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TJP3O95049 919 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TSPAN15O95858 294 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 PKMP14618 531 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 COMTP21964 271 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SFPQP23246 707 aaKnown RBP eCLIP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 MMP14P50281 582 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 PPP5CP53041 499 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SLC37A1P57057 533 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SHC2P98077 582 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 PSG6Q00889 435 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CDC37Q16543 378 aaPredicted RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 KYNUQ16719 465 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 VWA1Q6PCB0 445 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 FAM83HQ6ZRV2 1179 aaPredicted RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 Q6ZWC4 215 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CHST9Q7L1S5 443 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 KDELC2Q7Z4H8 507 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 C12orf76Q8N812 135 aaPredicted RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SETD9Q8NE22 299 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CPEB3Q8NE35 698 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CADM4Q8NFZ8 388 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 VMP1Q96GC9 406 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 MAP7D2Q96T17 732 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 ALG8Q9BVK2 526 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 HEMGNQ9BXL5 484 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 ANKRD2Q9GZV1 360 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SLC32A1Q9H598 525 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 TDRD3Q9H7E2 651 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 SFXN1Q9H9B4 322 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 POLR1BQ9H9Y6 1135 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 USP29Q9HBJ7 922 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 AMFRQ9UKV5 643 aa6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 INTS6Q9UL03 887 aaKnown RBP6.45□□□□□ -1.38
TGFBR1-208ENST00000550253 CACNA1FO60840 1977 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 CCL15-CCL14A0A0B4J2E2 113 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 C17orf113A0A1B0GUU1 675 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 TCP10L2B9ZVM9 353 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 NPIPB6E9PJ23 425 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 LPXNO60711 386 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 PAGE4O60829 102 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 TACC1O75410 805 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 CD72P21854 359 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 TBXAS1P24557 533 aaPredicted RBP6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 HIBADHP31937 336 aaKnown RBP6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 HSD17B4P51659 736 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 CDH8P55286 799 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 TPTEP56180 551 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 PRAMEP78395 509 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 PRPF4BQ13523 1007 aaKnown RBP6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 CCL15Q16663 113 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 SUPT20HL1Q3ZLR7 823 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 SLC9C1Q4G0N8 1177 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 RABL3Q5HYI8 236 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 TMEM154Q6P9G4 183 aa6.44□□□□□ -1.38
TGFBR1-208ENST00000550253 SARM1Q6SZW1 724 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms