RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PCDHB1Q9Y5F3 818 aa16.08■□□□□ 0.16
COX6A1-203ENST00000550009 A0A087X0T9 212 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 A0A0U1RQS6 177 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 FPGTO14772 594 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 CSF2P04141 144 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 FAM228BP0C875 321 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 NME1P15531 152 aaKnown RBP16.07■□□□□ 0.16
COX6A1-203ENST00000550009 JUNDP17535 347 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 GM2AP17900 193 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 NDST2P52849 883 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 AIF1P55008 147 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 DAB2P98082 770 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 MMRN1Q13201 1228 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 WSCD2Q2TBF2 565 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 PGBD5Q8N414 524 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 PDCD7Q8N8D1 485 aaKnown RBP16.07■□□□□ 0.16
COX6A1-203ENST00000550009 PLA2G15Q8NCC3 412 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 LMX1AQ8TE12 382 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 RAB7BQ96AH8 199 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 LRIG1Q96JA1 1093 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.07■□□□□ 0.16
COX6A1-203ENST00000550009 CLPBQ9H078 707 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 SUV39H2Q9H5I1 410 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 IFNKQ9P0W0 207 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 DKK3Q9UBP4 350 aa16.07■□□□□ 0.16
COX6A1-203ENST00000550009 DAPK3O43293 454 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 PRPSAP2O60256 369 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 PALMO75781 387 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 TM7SF2O76062 418 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 PEX11BO96011 259 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 GYPCP04921 128 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 CD48P09326 243 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 C6P13671 934 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 RABIFP47224 123 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 UBASH3AP57075 661 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 SLC10A7Q0GE19 358 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 RALGDSQ12967 914 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 CDKN3Q16667 212 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 TMEM52BQ4KMG9 183 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 ATP13A4Q4VNC1 1196 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 TDRD12Q587J7 1177 aaKnown RBP16.06■□□□□ 0.16
COX6A1-203ENST00000550009 GUSBP11Q6P575 273 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 SRLQ86TD4 932 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 PARGQ86W56 976 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 SFTPA2Q8IWL1 248 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 FNIP1Q8TF40 1166 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 SMIM14Q96QK8 99 aa16.06■□□□□ 0.16
COX6A1-203ENST00000550009 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
COX6A1-203ENST00000550009 TSPAN11A1L157 253 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 PMS2P1A4D2B8 440 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 ARHGAP42A6NI28 874 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 RIOK3O14730 519 aaKnown RBP16.05■□□□□ 0.16
COX6A1-203ENST00000550009 RNF8O76064 485 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 C1SP09871 688 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 RARAP10276 462 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 CKMT1AP12532 417 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 ITPKBP27987 946 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
COX6A1-203ENST00000550009 LIG3P49916 1009 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 UGP2Q16851 508 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 PERM1Q5SV97 790 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 POLNQ7Z5Q5 900 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 CASKIN2Q8WXE0 1202 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 TSACCQ96A04 125 aaPredicted RBP16.05■□□□□ 0.16
COX6A1-203ENST00000550009 LRRC61Q9BV99 259 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 NLGN3Q9NZ94 848 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 IPO11Q9UI26 975 aaKnown RBP16.05■□□□□ 0.16
COX6A1-203ENST00000550009 OR1A2Q9Y585 309 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 SCN8AQ9UQD0 1980 aa16.05■□□□□ 0.16
COX6A1-203ENST00000550009 A0A1W2PNU3 283 aaPredicted RBP16.04■□□□□ 0.16
COX6A1-203ENST00000550009 AQP9O43315 295 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 OPA1O60313 960 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 MAP3K6O95382 1288 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 MT-CO3P00414 261 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 PCCBP05166 539 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 TGM2P21980 687 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 MMP12P39900 470 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
COX6A1-203ENST00000550009 MAXP61244 160 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 HNRNPKP61978 463 aaKnown RBP eCLIP16.04■□□□□ 0.16
COX6A1-203ENST00000550009 SLC25A11Q02978 314 aaKnown RBP16.04■□□□□ 0.16
COX6A1-203ENST00000550009 RAD51Q06609 339 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 IHHQ14623 411 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 PRRT3Q5FWE3 981 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 FIGNQ5HY92 759 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 PHACTR4Q8IZ21 702 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 IFI44Q8TCB0 444 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 ASB12Q8WXK4 309 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 RFFLQ8WZ73 363 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 CSPG4P5Q96PW8 444 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 NUP85Q9BW27 656 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 PACSIN1Q9BY11 444 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 SP110Q9HB58 689 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 PCDH18Q9HCL0 1135 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
COX6A1-203ENST00000550009 DKK4Q9UBT3 224 aa16.04■□□□□ 0.16
COX6A1-203ENST00000550009 NENFQ9UMX5 172 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms