RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 PRRT3Q5FWE3 981 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 PPP6R3Q5H9R7 873 aaPredicted RBP15.91■□□□□ 0.14
CDK4-206ENST00000549606 FAXCQ5TGI0 409 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 CDCP2Q5VXM1 449 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 ZNF571Q7Z3V5 609 aaPredicted RBP15.91■□□□□ 0.14
CDK4-206ENST00000549606 PHACTR4Q8IZ21 702 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 ARFGAP1Q8N6T3 406 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 TP53I13Q8NBR0 393 aaPredicted RBP15.91■□□□□ 0.14
CDK4-206ENST00000549606 HCAR2Q8TDS4 363 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 DEPDC7Q96QD5 511 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 PEBP4Q96S96 227 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 KCTD15Q96SI1 283 aaPredicted RBP15.91■□□□□ 0.14
CDK4-206ENST00000549606 BPIFA3Q9BQP9 254 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 SNRNP25Q9BV90 132 aaKnown RBP15.91■□□□□ 0.14
CDK4-206ENST00000549606 SLC13A1Q9BZW2 595 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 CNOT8Q9UFF9 292 aaKnown RBP15.91■□□□□ 0.14
CDK4-206ENST00000549606 SALL4Q9UJQ4 1053 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 IGSF10Q6WRI0 2623 aa15.91■□□□□ 0.14
CDK4-206ENST00000549606 TMEM191CA6NGB0 347 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 DFFAO00273 331 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 PRPSAP2O60256 369 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 USP12O75317 370 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 CSO75390 466 aaKnown RBP15.9■□□□□ 0.14
CDK4-206ENST00000549606 GCATO75600 419 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 PALMO75781 387 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 ACTN2P35609 894 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 SUOXP51687 545 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 LRRC14Q15048 493 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 IRF4Q15306 451 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 GUSBP11Q6P575 273 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 EFL1Q7Z2Z2 1120 aaKnown RBP15.9■□□□□ 0.14
CDK4-206ENST00000549606 CAMK1DQ8IU85 385 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 FGF11Q92914 225 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 NAP1L5Q96NT1 182 aaPredicted RBP15.9■□□□□ 0.14
CDK4-206ENST00000549606 TRIM7Q9C029 511 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 PCDH12Q9NPG4 1184 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 AIPL1Q9NZN9 384 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 NCKIPSDQ9NZQ3 722 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 MYO1AQ9UBC5 1043 aa15.9■□□□□ 0.14
CDK4-206ENST00000549606 PNMA8BQ9ULN7 279 aaPredicted RBP15.9■□□□□ 0.14
CDK4-206ENST00000549606 EIF3CLB5ME19 914 aaKnown RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 TOR1BO14657 336 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 TPP1O14773 563 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 BUB1BO60566 1050 aaPredicted RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 PRKCGP05129 697 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 MPOP05164 745 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 ANXA6P08133 673 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 SKILP12757 684 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 C6P13671 934 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 ERCC2P18074 760 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 TGM2P21980 687 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 MIPP30301 263 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 RGRP47804 291 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 ZNF165P49910 485 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 PPARDQ03181 441 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 KLHL30Q0D2K2 578 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 NR0B2Q15466 257 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 CRTC1Q6UUV9 634 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 MACC1Q6ZN28 852 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 RFX8Q6ZV50 586 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 SRLQ86TD4 932 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 PAF1Q8N7H5 531 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 TSEN2Q8NCE0 465 aaKnown RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 SNIP1Q8TAD8 396 aaKnown RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 GLMNQ92990 594 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 ZNF653Q96CK0 615 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 ZNF641Q96N77 438 aaPredicted RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 EIF3CQ99613 913 aaKnown RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 LRRC61Q9BV99 259 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 CINPQ9BW66 212 aaPredicted RBP15.89■□□□□ 0.13
CDK4-206ENST00000549606 SP110Q9HB58 689 aa15.89■□□□□ 0.13
CDK4-206ENST00000549606 A0A1W2PQC6 194 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 TSPAN11A1L157 253 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 DDX3XO00571 662 aaKnown RBP eCLIP15.88■□□□□ 0.138e-17■■■■□ 25.6
CDK4-206ENST00000549606 MUSKO15146 869 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 LZTS3O60299 673 aaPredicted RBP15.88■□□□□ 0.13
CDK4-206ENST00000549606 SERPINC1P01008 464 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 GZMAP12544 262 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 TSHRP16473 764 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 SERPINA4P29622 427 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 LIG3P49916 1009 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 GABREP78334 506 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 CCDC173Q0VFZ6 552 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 INPP5AQ14642 412 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 TCEA2Q15560 299 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 WSCD2Q2TBF2 565 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 TBC1D25Q3MII6 688 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 E4F1Q66K89 784 aaPredicted RBP15.88■□□□□ 0.13
CDK4-206ENST00000549606 CAVIN1Q6NZI2 390 aaKnown RBP15.88■□□□□ 0.13
CDK4-206ENST00000549606 BRAT1Q6PJG6 821 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 ENPP7Q6UWV6 458 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 ARHGAP36Q6ZRI8 547 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 RD3Q7Z3Z2 195 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 ZSWIM9Q86XI8 627 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 HID1Q8IV36 788 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 ARHGAP12Q8IWW6 846 aa15.88■□□□□ 0.13
CDK4-206ENST00000549606 TSACCQ96A04 125 aaPredicted RBP15.88■□□□□ 0.13
CDK4-206ENST00000549606 BBC3Q96PG8 261 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms