RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 MAPK15Q8TD08 544 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 BTN2A2Q8WVV5 523 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 FGF11Q92914 225 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 CELF6Q96J87 481 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 EIF3CQ99613 913 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 BOCQ9BWV1 1114 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 TRIM7Q9C029 511 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 DHX35Q9H5Z1 703 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 PARVAQ9NVD7 372 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 NCKIPSDQ9NZQ3 722 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 SPASTQ9UBP0 616 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 SALL4Q9UJQ4 1053 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 SHROOM3Q8TF72 1996 aa17.57■□□□□ 0.4
CHMP1A-205ENST00000548650 KIF26BQ2KJY2 2108 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 EEF2KO00418 725 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 TOR1BO14657 336 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 C6P13671 934 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 TNFAIP3P21580 790 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 ACTN2P35609 894 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 MMP12P39900 470 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 RGRP47804 291 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 ACAP1Q15027 740 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 PRRT3Q5FWE3 981 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 AFMIDQ63HM1 303 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 LRRC69Q6ZNQ3 347 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 RFX8Q6ZV50 586 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 EFL1Q7Z2Z2 1120 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 ARHGAP12Q8IWW6 846 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 NPWQ8N729 165 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 HCAR2Q8TDS4 363 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 KCTD15Q96SI1 283 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 BPIFA3Q9BQP9 254 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 SLC39A8Q9C0K1 460 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 PRORYQ9H606 182 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 PCDH12Q9NPG4 1184 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 COQ6Q9Y2Z9 468 aa17.56■□□□□ 0.4
CHMP1A-205ENST00000548650 EME2A4GXA9 379 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 TMEM191CA6NGB0 347 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 LMO7DNF2Z398 122 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 RIOK3O14730 519 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 RRP8O43159 456 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 BUB1BO60566 1050 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 DXOO77932 396 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 MPOP05164 745 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 TGM2P21980 687 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 XPAP23025 273 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 EIF4A3P38919 411 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 PAPOLAP51003 745 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 GABREP78334 506 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 C1orf61Q13536 156 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 GRM3Q14832 879 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 ASIC2Q16515 512 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 UGP2Q16851 508 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 WSCD2Q2TBF2 565 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 C6orf132Q5T0Z8 1188 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 ZNF571Q7Z3V5 609 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 SLC35F3Q8IY50 421 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 FNIP1Q8TF40 1166 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 TUBGCP5Q96RT8 1024 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 IL12RB2Q99665 862 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 CLPBQ9H078 707 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 NAT10Q9H0A0 1025 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 SUV39H2Q9H5I1 410 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 PCSK1NQ9UHG2 260 aa17.55■□□□□ 0.4
CHMP1A-205ENST00000548650 BPTFQ12830 3046 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 CPED1A4D0V7 1026 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 ARHGAP42A6NI28 874 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 USP12O75317 370 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 PRKCGP05129 697 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 CELA2BP08218 269 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 PRKCIP41743 596 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 LRRC14Q15048 493 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 AGERQ15109 404 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 NR0B2Q15466 257 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 ISXQ2M1V0 245 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 PERM1Q5SV97 790 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 ERMARDQ5T6L9 678 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 BRAT1Q6PJG6 821 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 CAMK1DQ8IU85 385 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 HIC2Q96JB3 615 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 ZNF641Q96N77 438 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 SLC13A1Q9BZW2 595 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 ABCG4Q9H172 646 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 HAUS4Q9H6D7 363 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 ATP8A1Q9Y2Q0 1164 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 RAI2Q9Y5P3 530 aa17.54■□□□□ 0.4
CHMP1A-205ENST00000548650 A0A1W2PNU3 283 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 A0A1W2PQC6 194 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 DDX3XO00571 662 aaKnown RBP eCLIP17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 MUSKO15146 869 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 LRCH4O75427 683 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 TSHRP16473 764 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ERCC2P18074 760 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 MIPP30301 263 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 CSNK1DP48730 415 aa17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 ADKP55263 362 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-205ENST00000548650 PPARDQ03181 441 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms