RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PIP4P1Q86T03 277 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 SERPINA11Q86U17 422 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CADM3Q8N126 398 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 SLC44A5Q8NCS7 719 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 MCPH1Q8NEM0 835 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CMASQ8NFW8 434 aaPredicted RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CADM4Q8NFZ8 388 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 NEK9Q8TD19 979 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CUL5Q93034 780 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 ZG16BQ96DA0 208 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 STRA6Q9BX79 667 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 PLEKHA4Q9H4M7 779 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 WDR6Q9NNW5 1121 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 TMEM184CQ9NVA4 438 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 BABAM1Q9NWV8 329 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 SEL1LQ9UBV2 794 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 SLCO3A1Q9UIG8 710 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CDH22Q9UJ99 828 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 A4GNTQ9UNA3 340 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 SLC4A4Q9Y6R1 1079 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CAPN7Q9Y6W3 813 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 DEPDC5O75140 1603 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 RNF17Q9BXT8 1623 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 ABCC3O15438 1527 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ARHGAP31Q2M1Z3 1444 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ZMYM2Q9UBW7 1377 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 A0A1W2PQF6 199 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 FSD2A1L4K1 749 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 DDTLA6NHG4 134 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 IFNL4K9M1U5 179 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 CCNDBP1O95273 360 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ZNF8P17098 575 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 TNFSF8P32971 234 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 PTGER1P34995 402 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ARHGAP25P42331 645 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 GABRB2P47870 512 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 HMGA2P52926 109 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 DRG2P55039 364 aaKnown RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 CLDN2P57739 230 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 YWHAZP63104 245 aaKnown RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ZNF91Q05481 1191 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 TMEM115Q12893 351 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 TAF11Q15544 211 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 GSTA3Q16772 222 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 C6orf10Q5SRN2 563 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 GPSM1Q86YR5 675 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 CCDC105Q8IYK2 499 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 CNTROBQ8N137 903 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 NME8Q8N427 588 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 USP6NLQ92738 828 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 SNAPC3Q92966 411 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 MAP7D2Q96T17 732 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 AAMDCQ9H7C9 122 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 SCPEP1Q9HB40 452 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 KRT84Q9NSB2 600 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 DIAPH3Q9NSV4 1193 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 MSRB1Q9NZV6 116 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 PLEKHB1Q9UF11 243 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 INTS6Q9UL03 887 aaKnown RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 LAS1LQ9Y4W2 734 aaKnown RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.31□□□□□ -1.72
PTCH1-216ENST00000548379 SYNMO15061 1565 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 TIAM1Q13009 1591 aa4.31□□□□□ -1.72
PTCH1-216ENST00000548379 ERBINQ96RT1 1412 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 ANKRD30AQ9BXX3 1397 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 ADGBQ8N7X0 1667 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 A6NCN8 305 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 A6NNC1 897 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 HSPB6O14558 160 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 PAGE4O60829 102 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 IFNA2P01563 188 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 HOXB5P09067 269 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 MYZAPP0CAP1 466 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 SLC2A4P14672 509 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 EDN2P20800 178 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 HOXD13P35453 343 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 MLH1P40692 756 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 GPR12P47775 334 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 CTCFP49711 727 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 NAP1L1P55209 391 aaKnown RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 OLR1P78380 273 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 MAMLD1Q13495 774 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 MTX1Q13505 466 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 CCNG2Q16589 344 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 ITPRIPL1Q6GPH6 555 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 DPP10Q8N608 796 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 PIGOQ8TEQ8 1089 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 DDB2Q92466 427 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 INTS12Q96CB8 462 aaKnown RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 ZNF419Q96HQ0 510 aaPredicted RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 RSRC1Q96IZ7 334 aaKnown RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 ZFYVE19Q96K21 471 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 B3GNT4Q9C0J1 378 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 GHITMQ9H3K2 345 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms