RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 GRIA4P48058 902 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 EPHB1P54762 984 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 DNAJC3Q13217 504 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 EIF4HQ15056 248 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 UGP2Q16851 508 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TSTD2Q5T7W7 516 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ARMC12Q5T9G4 340 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 VITQ6UXI7 678 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 LMNTD2Q8IXW0 634 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 BRSK1Q8TDC3 778 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ALKBH8Q96BT7 664 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 MFSD3Q96ES6 412 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 MYO19Q96H55 970 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 MYADMQ96S97 322 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SMC6Q96SB8 1091 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SELENOSQ9BQE4 189 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 FAM83CQ9BQN1 747 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TRIM56Q9BRZ2 755 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TM6SF2Q9BZW4 377 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TRABDQ9H4I3 376 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ECT2Q9H8V3 914 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SSU72Q9NP77 194 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 TREX1Q9NSU2 369 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 DEC1Q9P2X7 70 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ADAM21Q9UKJ8 722 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 SMG5Q9UPR3 1016 aaKnown RBP12.47□□□□□ -0.41
RAB5B-204ENST00000548068 ERVW-1Q9UQF0 538 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 CHKBQ9Y259 395 aa12.47□□□□□ -0.41
RAB5B-204ENST00000548068 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 MROH6A6NGR9 719 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 CXorf49A8MYA2 514 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 K7ERQ8 282 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 SMAD6O43541 496 aaKnown RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 TIMM44O43615 452 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 GJB3O75712 270 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 MT-ND3P03897 115 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 ARSAP15289 507 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 SPRP35270 261 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 GP5P40197 560 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 EIF2DP41214 584 aaKnown RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 CSE1LP55060 971 aaKnown RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 ST8SIA6P61647 398 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 GABPB1Q06547 395 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 TRAF2Q12933 501 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 GALNT3Q14435 633 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 IHHQ14623 411 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 E2F5Q15329 346 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 ATXN7L2Q5T6C5 722 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 GRTP1Q5TC63 336 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 TRIM68Q6AZZ1 485 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 CES3Q6UWW8 571 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 PACS1Q6VY07 963 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 ADIPOR2Q86V24 386 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 ETFBKMTQ8IXQ9 262 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 CYP4X1Q8N118 509 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 NDUFAF2Q8N183 169 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 RYBPQ8N488 228 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 PAF1Q8N7H5 531 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 NAT16Q8N8M0 369 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 LPCAT1Q8NF37 534 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 BLOC1S5Q8TDH9 187 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 MSLNLQ96KJ4 702 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 RPL10LQ96L21 214 aaKnown RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 CPEB1Q9BZB8 566 aaKnown RBP12.46□□□□□ -0.41
RAB5B-204ENST00000548068 EBF3Q9H4W6 596 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 SMYD2Q9NRG4 433 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 CD207Q9UJ71 328 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 PCDHGC4Q9Y5F7 938 aa12.46□□□□□ -0.41
RAB5B-204ENST00000548068 COL4A3Q01955 1670 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 C2orf81A6NN90 581 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 TNRC18O15417 2968 aaPredicted RBP12.45□□□□□ -0.42
RAB5B-204ENST00000548068 SLC7A4O43246 635 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 TULP3O75386 442 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 PGLSO95336 258 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 POP4O95707 220 aaKnown RBP12.45□□□□□ -0.42
RAB5B-204ENST00000548068 DLDP09622 509 aaKnown RBP12.45□□□□□ -0.42
RAB5B-204ENST00000548068 CISD3P0C7P0 127 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 ERVK-10P10266 1014 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 BRAFP15056 766 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 IGFBP4P22692 258 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 NFKBIAP25963 317 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 HADHAP40939 763 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 CTSOP43234 321 aaPredicted RBP12.45□□□□□ -0.42
RAB5B-204ENST00000548068 STK19P49842 368 aaPredicted RBP12.45□□□□□ -0.42
RAB5B-204ENST00000548068 ATP1A2P50993 1020 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 PRAMEP78395 509 aa12.45□□□□□ -0.42
RAB5B-204ENST00000548068 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms