RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CSF2P04141 144 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 GIMD1P0DJR0 217 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CKMT1AP12532 417 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ACP1P24666 158 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PI4KAP42356 2102 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PAPOLAP51003 745 aaKnown RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 THOP1P52888 689 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PFN3P60673 137 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 HNRNPKP61978 463 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 INSM1Q01101 510 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 KLHL30Q0D2K2 578 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 C1orf61Q13536 156 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 AGERQ15109 404 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 KLHL40Q2TBA0 621 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 INO80DQ53TQ3 878 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PPP6R3Q5H9R7 873 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 TPRG1LQ5T0D9 272 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CFAP58Q5T655 872 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ERMARDQ5T6L9 678 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PLEKHA7Q6IQ23 1121 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PPP1R2P3Q6NXS1 205 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 KYAT3Q6YP21 454 aaKnown RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF571Q7Z3V5 609 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CAMK1DQ8IU85 385 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ARFGAP1Q8N6T3 406 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PAF1Q8N7H5 531 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF548Q8NEK5 533 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 LMX1AQ8TE12 382 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CASKIN2Q8WXE0 1202 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ASB12Q8WXK4 309 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 VOPP1Q96AW1 172 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CENPTQ96BT3 561 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 IFT43Q96FT9 208 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 APOLD1Q96LR9 279 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 BPIFA3Q9BQP9 254 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 SYT11Q9BT88 431 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 TRIM7Q9C029 511 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 SLC39A8Q9C0K1 460 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 SUV39H2Q9H5I1 410 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 MBNL1Q9NR56 388 aaKnown RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 DONSONQ9NYP3 566 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 NLGN3Q9NZ94 848 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 AIPL1Q9NZN9 384 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 MAP10Q9P2G4 905 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 MYO1AQ9UBC5 1043 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 UBA2Q9UBT2 640 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 DKK4Q9UBT3 224 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CNOT8Q9UFF9 292 aaKnown RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 MYO6Q9UM54 1294 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 AP4E1Q9UPM8 1137 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 COQ6Q9Y2Z9 468 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 MFHAS1Q9Y4C4 1052 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 ZZEF1O43149 2961 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 H3BM21 787 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DFFAO00273 331 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DDX3XO00571 662 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 AQP9O43315 295 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 OPA1O60313 960 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 BUB1BO60566 1050 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PRAMEF11O60813 436 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PALMO75781 387 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PIGNO95427 931 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PRKCGP05129 697 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 GZMAP12544 262 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 NME1P15531 152 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 ERCC2P18074 760 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 MIPP30301 263 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 EIF4A3P38919 411 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 LIG3P49916 1009 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DUSP3P51452 185 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 NDST2P52849 883 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 ADKP55263 362 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PTK2BQ14289 1009 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 NR1I3Q14994 352 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 LRRC14Q15048 493 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 TCEA2Q15560 299 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 CDKN3Q16667 212 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 UGP2Q16851 508 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DEFB133Q30KQ1 61 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PRRT3Q5FWE3 981 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 LCE2CQ5TA81 110 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 FAXCQ5TGI0 409 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 E4F1Q66K89 784 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 RFX8Q6ZV50 586 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 RD3Q7Z3Z2 195 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 SRLQ86TD4 932 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PDZD3Q86UT5 571 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PARGQ86W56 976 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 RBFAQ8N0V3 343 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 DCBLD1Q8N8Z6 715 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 TSEN2Q8NCE0 465 aaKnown RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 CPLX3Q8WVH0 158 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF653Q96CK0 615 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 NXPE2Q96DL1 559 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 PEBP4Q96S96 227 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 KCTD15Q96SI1 283 aaPredicted RBP6.77□□□□□ -1.33
SCAF11-211ENST00000547950 IL12RB2Q99665 862 aa6.77□□□□□ -1.33
SCAF11-211ENST00000547950 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms