RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ECDO95905 644 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 LINGO3P0C6S8 592 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 CHRNA5P30532 468 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 KCTD8Q6ZWB6 473 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 CBR4Q8N4T8 237 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 C9orf43Q8TAL5 461 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 EFHD2Q96C19 240 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 TEFMQ96QE5 360 aaKnown RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 GPN1Q9HCN4 374 aaPredicted RBP12.88□□□□□ -0.35
PTCH1-212ENST00000546744 SPATA7Q9P0W8 599 aa12.88□□□□□ -0.35
PTCH1-212ENST00000546744 NOTOA8MTQ0 251 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SLC28A1O00337 649 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A9O60656 530 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TADA2AO75478 443 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TIPRLO75663 272 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A6P19224 532 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A1P22309 533 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A4P22310 534 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A3P35503 534 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A5P35504 534 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 CACNB3P54284 484 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TWF1Q12792 350 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 PLEKHG6Q3KR16 790 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UNC93AQ86WB7 457 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 HSFY1Q96LI6 401 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 PDCD10Q9BUL8 212 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A7Q9HAW7 530 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A10Q9HAW8 530 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UGT1A8Q9HAW9 530 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SEC22BO75396 215 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 IFNA16P05015 189 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 HGFP14210 728 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 LHX1P48742 406 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 LCN1P1Q5VSP4 162 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ZDHHC24Q6UX98 284 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ILDR2Q71H61 639 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 KCNK18Q7Z418 384 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ARMC8Q8IUR7 673 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 RELL1Q8IUW5 271 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ASB9Q96DX5 294 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SFMBT1Q9UHJ3 866 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TLL2Q9Y6L7 1015 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 A0A1W2PQ72 361 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 A6NHS1 94 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 FGF10O15520 208 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ZMPSTE24O75844 475 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SCELO95171 688 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
PTCH1-212ENST00000546744 MYL3P08590 195 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 STARP49675 285 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 JAM2P57087 298 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ABATP80404 500 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 POU6F1Q14863 301 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ZSWIM7Q19AV6 140 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TMPRSS11AQ6ZMR5 421 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 USP43Q70EL4 1123 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
PTCH1-212ENST00000546744 CPSF7Q8N684 471 aaKnown RBP12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ACOX2Q99424 681 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 SPATA5L1Q9BVQ7 753 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TMEM134Q9H6X4 195 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 PCDH12Q9NPG4 1184 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 CMTM6Q9NX76 183 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 PIN4Q9Y237 131 aaKnown RBP12.87□□□□□ -0.35
PTCH1-212ENST00000546744 UBR2Q8IWV8 1755 aa12.87□□□□□ -0.35
PTCH1-212ENST00000546744 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 MDM4O15151 490 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 BNIP3LO60238 219 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 CCNT2O60583 730 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 NOL4O94818 638 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 CPSF4O95639 269 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SLC25A27O95847 323 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 MT-CO1P00395 513 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 GSTM1P09488 218 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 GNG2P59768 71 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 IL2P60568 153 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 PHC1P78364 1004 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 ALDH6A1Q02252 535 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 CXXC5Q7LFL8 322 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SMG8Q8ND04 991 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 OR2T12Q8NG77 320 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 EEF1AKMT1Q8WVE0 214 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 CD101Q93033 1021 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 PANX3Q96QZ0 392 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 SAMHD1Q9Y3Z3 626 aaKnown RBP12.86□□□□□ -0.35
PTCH1-212ENST00000546744 BCKDKO14874 412 aa12.86□□□□□ -0.35
PTCH1-212ENST00000546744 REM1O75628 298 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms