RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PRSS56P0CW18 603 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 RXRGP48443 463 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 PIK3CGP48736 1102 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 GPR158Q5T848 1215 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF410Q86VK4 478 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 DHFR2Q86XF0 187 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 SCN4BQ8IWT1 228 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 APPL2Q8NEU8 664 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 LPPQ93052 612 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 ITCHQ96J02 903 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 RNF145Q96MT1 663 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 ABHD16BQ9H3Z7 469 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 DNAJC28Q9NX36 388 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 PTTG2Q9NZH5 202 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 FLRT1Q9NZU1 646 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 SH3BP1Q9Y3L3 701 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 MANSC4A6NHS7 340 aaPredicted RBP14.77□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF195O14628 629 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 CD247P20963 164 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 LIMK2P53671 638 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 NR1H2P55055 460 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 CBX3Q13185 183 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 PFKFB4Q16877 469 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 C6orf10Q5SRN2 563 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.04
HOXC11-202ENST00000546378 GTF3C2Q8WUA4 911 aaPredicted RBP14.77□□□□□ -0.04
HOXC11-202ENST00000546378 GAB3Q8WWW8 586 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 NIFKQ9BYG3 293 aaKnown RBP14.77□□□□□ -0.04
HOXC11-202ENST00000546378 ALG2Q9H553 416 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 POLE4Q9NR33 117 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 FETUBQ9UGM5 382 aa14.77□□□□□ -0.04
HOXC11-202ENST00000546378 LINC00854A0A1B0GVQ3 168 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 AOC2O75106 756 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 GJB3O75712 270 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 SRP72O76094 671 aaKnown RBP14.77□□□□□ -0.05
HOXC11-202ENST00000546378 LAPTM5Q13571 262 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 GRTP1Q5TC63 336 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 LIPMQ5VYY2 423 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 CLEC4FQ8N1N0 589 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 BLOC1S5Q8TDH9 187 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 SH3RF2Q8TEC5 729 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 KBTBD7Q8WVZ9 684 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 C12orf43Q96C57 262 aaKnown RBP14.77□□□□□ -0.05
HOXC11-202ENST00000546378 TBCDQ9BTW9 1192 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 ZFYVE28Q9HCC9 887 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 FAM8A1Q9UBU6 413 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 OR12D3Q9UGF7 316 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 DMTF1Q9Y222 760 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 RAP2CQ9Y3L5 183 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 DOCK3Q8IZD9 2030 aa14.77□□□□□ -0.05
HOXC11-202ENST00000546378 MATN2O00339 956 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 EI24O14681 340 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 KPNA6O60684 536 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 HTRA3P83110 453 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 PSTKQ8IV42 348 aaKnown RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 TRPC4APQ8TEL6 797 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 NSUN5Q96P11 429 aaKnown RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 MRPS26Q9BYN8 205 aaKnown RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 C1orf21Q9H246 121 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 WDCPQ9H6R7 721 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 VTA1Q9NP79 307 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 C6orf203Q9P0P8 240 aaPredicted RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 MORF4L1Q9UBU8 362 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 CNOT6Q9ULM6 557 aaKnown RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 ST14Q9Y5Y6 855 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 IGKV6D-21A0A0A0MT36 114 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 ANGPT2O15123 496 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 NFKBIAP25963 317 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 CDH5P33151 784 aaPredicted RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 NIPAL4Q0D2K0 466 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 IKBKEQ14164 716 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 CCDC153Q494R4 210 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 REP15Q6BDI9 236 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 KLHL23Q8NBE8 558 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 DTNBP1Q96EV8 351 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 EXOC2Q96KP1 924 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 CCDC138Q96M89 665 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 HAPLN3Q96S86 360 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 BCO2Q9BYV7 579 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 MID1IP1Q9NPA3 183 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 PRMT7Q9NVM4 692 aaPredicted RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 ELK4P28324 431 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 PRKAA1Q13131 559 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 MAP2K5Q13163 448 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 GPRIN1Q7Z2K8 1008 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 PATL1Q86TB9 770 aaKnown RBP14.76□□□□□ -0.05
HOXC11-202ENST00000546378 OXSMQ9NWU1 459 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 RIMS3Q9UJD0 308 aa14.76□□□□□ -0.05
HOXC11-202ENST00000546378 IL18RAPO95256 599 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 PGK1P00558 417 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 EEF1DP29692 281 aaKnown RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 OXTRP30559 389 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 SLC1A2P43004 574 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 BST2Q10589 180 aaKnown RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 GRB14Q14449 540 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 TARBP2Q15633 366 aaKnown RBP14.75□□□□□ -0.05
HOXC11-202ENST00000546378 PIGGQ5H8A4 983 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 FBXO47Q5MNV8 452 aa14.75□□□□□ -0.05
HOXC11-202ENST00000546378 POTEHQ6S545 545 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms