RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ALPIP09923 528 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 ITGB6P18564 788 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 CSRP3P50461 194 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 SUOXP51687 545 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 CCL7P80098 99 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 AGERQ15109 404 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 TGIF1Q15583 401 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 C15orf59Q2T9L4 293 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-225ENST00000545934 WSCD2Q2TBF2 565 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 CCDC14Q49A88 953 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 INO80DQ53TQ3 878 aaPredicted RBP16.85■□□□□ 0.29
CPSF7-225ENST00000545934 KLHDC7AQ5VTJ3 777 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 RWDD4Q6NW29 188 aaKnown RBP16.85■□□□□ 0.29
CPSF7-225ENST00000545934 MSANTD4Q8NCY6 345 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 EPS8L1Q8TE68 723 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 CASKIN2Q8WXE0 1202 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 CPA5Q8WXQ8 436 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 TBC1D31Q96DN5 1066 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 GDAP1L1Q96MZ0 367 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 WRAP53Q9BUR4 548 aaKnown RBP16.85■□□□□ 0.29
CPSF7-225ENST00000545934 NDST4Q9H3R1 872 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 SYNDIG1Q9H7V2 258 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 GULP1Q9UBP9 304 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 HPCAL4Q9UM19 191 aa16.85■□□□□ 0.29
CPSF7-225ENST00000545934 AHCTF1Q8WYP5 2266 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 TSPAN11A1L157 253 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 C2CD4BA6NLJ0 364 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 TERTO14746 1132 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 RASGRP1O95267 797 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 ITGB2P05107 769 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 RPLP0P05388 317 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 LIPCP11150 499 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 HGFP14210 728 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 PTPN9P43378 593 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 INHBCP55103 352 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 SRSF6Q13247 344 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 RAPGEF1Q13905 1077 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 NFATC4Q14934 902 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 LRRC14Q15048 493 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 VWA3BQ502W6 1294 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 NAA35Q5VZE5 725 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 STRADAQ7RTN6 431 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 HID1Q8IV36 788 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 GPR156Q8NFN8 814 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 OR6C4Q8NGE1 309 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 HCAR2Q8TDS4 363 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 RXFP2Q8WXD0 754 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 SCG3Q8WXD2 468 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 TSACCQ96A04 125 aaPredicted RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 SGF29Q96ES7 293 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 TMEM74Q96NL1 305 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 CPEB1Q9BZB8 566 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 FOXP3Q9BZS1 431 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 STRADBQ9C0K7 418 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 KLC2Q9H0B6 622 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 LRRN3Q9H3W5 708 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 STARD5Q9NSY2 213 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 SIRPGQ9P1W8 387 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 APPL1Q9UKG1 709 aa16.84■□□□□ 0.29
CPSF7-225ENST00000545934 ZFC3H1O60293 1989 aaKnown RBP16.84■□□□□ 0.29
CPSF7-225ENST00000545934 BUB1O43683 1085 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 GJB6O95452 261 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 IGSF6O95976 241 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 CYP1A1P04798 512 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-225ENST00000545934 PLEKP08567 350 aaPredicted RBP16.83■□□□□ 0.28
CPSF7-225ENST00000545934 MMP8P22894 467 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 HDAC4P56524 1084 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 RAD51Q06609 339 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 ZFP36L1Q07352 338 aaKnown RBP16.83■□□□□ 0.28
CPSF7-225ENST00000545934 ELP6Q0PNE2 266 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 NFATC3Q12968 1075 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 CDO1Q16878 200 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 KCTD16Q68DU8 428 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 PRICKLE2Q7Z3G6 844 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 GKN2Q86XP6 184 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 JOSD2Q8TAC2 188 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 NTAN1Q96AB6 310 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 RBM15Q96T37 977 aaKnown RBP eCLIP16.83■□□□□ 0.28
CPSF7-225ENST00000545934 APOOQ9BUR5 198 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 LHX3Q9UBR4 397 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 NOCTQ9UK39 431 aaKnown RBP16.83■□□□□ 0.28
CPSF7-225ENST00000545934 GPR34Q9UPC5 381 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 DOLKQ9UPQ8 538 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 COQ6Q9Y2Z9 468 aa16.83■□□□□ 0.28
CPSF7-225ENST00000545934 F8VZ95 297 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 INSIG1O15503 277 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 CTSEP14091 401 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 UCHL3P15374 230 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 PNLIPP16233 465 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 SDC4P31431 198 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 SRP54P61011 504 aaKnown RBP16.82■□□□□ 0.28
CPSF7-225ENST00000545934 INPP5AQ14642 412 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 OGFOD3Q6PK18 319 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 ENPP7Q6UWV6 458 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 USP53Q70EK8 1073 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 ZNF677Q86XU0 584 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 DTX1Q86Y01 620 aa16.82■□□□□ 0.28
CPSF7-225ENST00000545934 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms