RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 VPS51Q9UID3 782 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 MYLKQ15746 1914 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CCDC78A2IDD5 438 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CCT8L1PA6NM43 557 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GRXCR1A8MXD5 290 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 SNAP91O60641 907 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 PLIN3O60664 434 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 RFPL2O75678 378 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GJB3O75712 270 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GSRP00390 522 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 PRLP01236 227 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CYBBP04839 570 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 C2P06681 752 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 COL6A2P12110 1019 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 TCF3P15923 654 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 IRS1P35568 1242 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 AVPR1AP37288 418 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CSKP41240 450 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 LEPRP48357 1165 aaKnown RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GRM3Q14832 879 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 NCEH1Q6PIU2 408 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 OTOAQ7RTW8 1153 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CLEC14AQ86T13 490 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 SRLQ86TD4 932 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 NUDCD3Q8IVD9 361 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 STYXQ8WUJ0 223 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CCT6BQ92526 530 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 NSMCE3Q96MG7 304 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 KLHL14Q9P2G3 628 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 LHX3Q9UBR4 397 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GGT7Q9UJ14 662 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 EMCNQ9ULC0 261 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 DOCK6Q96HP0 2047 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 A0A096LPK6 155 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 ARHGEF15O94989 841 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 PAPLNO95428 1278 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CRTAMO95727 393 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 PROCP04070 461 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 NEFHP12036 1026 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 SLC1A2P43004 574 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CD151P48509 253 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CSNK1DP48730 415 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 ERVK-21P61565 698 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CTBP1Q13363 440 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 SMAD1Q15797 465 aaKnown RBP12.83□□□□□ -0.36
PAAF1-214ENST00000544552 LACTB2Q53H82 288 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-214ENST00000544552 PPM1JQ5JR12 505 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 PRSS36Q5K4E3 855 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 ZNF470Q6ECI4 717 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 ELMSAN1Q6PJG2 1045 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CCDC121Q6ZUS5 278 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 DENND6AQ8IWF6 608 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 OTUD6BQ8N6M0 293 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 KIAA1958Q8N8K9 716 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CCDC63Q8NA47 563 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 GPR150Q8NGU9 434 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 SCG3Q8WXD2 468 aaKnown RBP12.83□□□□□ -0.36
PAAF1-214ENST00000544552 USP13Q92995 863 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-214ENST00000544552 E2F7Q96AV8 911 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 ADGRE3Q9BY15 652 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 TDP1Q9NUW8 608 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 CHKBQ9Y259 395 aa12.83□□□□□ -0.36
PAAF1-214ENST00000544552 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
PAAF1-214ENST00000544552 HELZP42694 1942 aaKnown RBP12.83□□□□□ -0.36
PAAF1-214ENST00000544552 ZNF197O14709 1029 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 SCAMP3O14828 347 aaKnown RBP12.82□□□□□ -0.36
PAAF1-214ENST00000544552 PRKCGP05129 697 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 EPCAMP16422 314 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 BGNP21810 368 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 CRABP2P29373 138 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 CORO7P57737 925 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 AP1S1P61966 158 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 PRAMEP78395 509 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 POU4F1Q01851 419 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 USP10Q14694 798 aaKnown RBP12.82□□□□□ -0.36
PAAF1-214ENST00000544552 TEAD2Q15562 447 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 TAF1AQ15573 450 aaPredicted RBP12.82□□□□□ -0.36
PAAF1-214ENST00000544552 LINGO4Q6UY18 593 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 TRPM8Q7Z2W7 1104 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 CMC1Q7Z7K0 106 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 CILP2Q8IUL8 1156 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 APCDD1Q8J025 514 aa12.82□□□□□ -0.36
PAAF1-214ENST00000544552 ZNF557Q8N988 423 aaPredicted RBP12.82□□□□□ -0.36
PAAF1-214ENST00000544552 HDAC10Q969S8 669 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms