RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 COQ6Q9Y2Z9 468 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PCDHGA1Q9Y5H4 931 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PLXNB3Q9ULL4 1909 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 TSPAN11A1L157 253 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 TRABD2BA6NFA1 517 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 RFPL3O75679 317 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 PEX11BO96011 259 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 CSF2P04141 144 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 IL4RP24394 825 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 IGFALSP35858 605 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 EIF4A3P38919 411 aaKnown RBP10.81□□□□□ -0.68
CHEK1-218ENST00000544373 RABIFP47224 123 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 SLC25A11Q02978 314 aaKnown RBP10.81□□□□□ -0.68
CHEK1-218ENST00000544373 SLC10A7Q0GE19 358 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 EIF2B5Q13144 721 aaKnown RBP10.81□□□□□ -0.68
CHEK1-218ENST00000544373 ZNF211Q13398 564 aaPredicted RBP10.81□□□□□ -0.68
CHEK1-218ENST00000544373 ATP13A4Q4VNC1 1196 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 BOLA3Q53S33 107 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 SRLQ86TD4 932 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 PROSER1Q86XN7 944 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 OR4C6Q8NH72 309 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 CXorf40AQ8TE69 158 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 NCAPGQ9BPX3 1015 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 PACSIN1Q9BY11 444 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 TCEAL2Q9H3H9 227 aaPredicted RBP10.81□□□□□ -0.68
CHEK1-218ENST00000544373 SP110Q9HB58 689 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 PCDH18Q9HCL0 1135 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 DONSONQ9NYP3 566 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 ANAPC7Q9UJX3 599 aa10.81□□□□□ -0.68
CHEK1-218ENST00000544373 LY6G6EA0A0G2JKS1 128 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 TM7SF2O76062 418 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 CD48P09326 243 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 NME1P15531 152 aaKnown RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 HNRNPH3P31942 346 aaKnown RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 IL10RBQ08334 325 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 CYP4F3Q08477 520 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 PIGHQ14442 188 aaPredicted RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 ACAP1Q15027 740 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 TMEM52BQ4KMG9 183 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 DCP2Q8IU60 420 aaKnown RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 RBFAQ8N0V3 343 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 GALNT15Q8N3T1 639 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 NIPA2Q8N8Q9 360 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 TP53I13Q8NBR0 393 aaPredicted RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 DENND6BQ8NEG7 585 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 ZNF548Q8NEK5 533 aaPredicted RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 IFT43Q96FT9 208 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 ZNF641Q96N77 438 aaPredicted RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 CINPQ9BW66 212 aaPredicted RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 CCDC86Q9H6F5 360 aaKnown RBP10.8□□□□□ -0.68
CHEK1-218ENST00000544373 IP6K2Q9UHH9 426 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 U3KQA8 63 aa10.8□□□□□ -0.68
CHEK1-218ENST00000544373 H3BRJ5 948 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 K7ESM1 405 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 SCAMP1O15126 338 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 GCATO75600 419 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 C1SP09871 688 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 JUPP14923 745 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 XPAP23025 273 aaPredicted RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 ACP1P24666 158 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 ARL4AP40617 200 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 CSNK1DP48730 415 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 LIG3P49916 1009 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 SCNN1BP51168 640 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 ZNF135P52742 658 aaPredicted RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 TARDBPQ13148 414 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 LBRQ14739 615 aaKnown RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 IRF4Q15306 451 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 WSCD2Q2TBF2 565 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 HES3Q5TGS1 186 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 ZSCAN30Q86W11 494 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 PARGQ86W56 976 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 TMPRSS12Q86WS5 348 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 PGBD5Q8N414 524 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 RNF214Q8ND24 703 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 HCAR2Q8TDS4 363 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 IQCDQ96DY2 449 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 APOLD1Q96LR9 279 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 PSKH2Q96QS6 385 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 IGSF10Q6WRI0 2623 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 A8MX80 341 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 MYO1FO00160 1098 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 TRAFD1O14545 582 aaPredicted RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 MAFKO60675 156 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 C6P13671 934 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 JUNDP17535 347 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 PTMSP20962 102 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 MMP12P39900 470 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 SSR1P43307 286 aaKnown RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 CDH6P55285 790 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 HNRNPKP61978 463 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 NSUN2Q08J23 767 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 C1orf61Q13536 156 aa10.79□□□□□ -0.68
CHEK1-218ENST00000544373 RFTN1Q14699 578 aaPredicted RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 ASTE1Q2TB18 679 aaPredicted RBP10.79□□□□□ -0.68
CHEK1-218ENST00000544373 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms