RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 CCM2Q9BSQ5 444 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MMP27Q9H306 513 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 JMJD4Q9H9V9 463 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 UTYO14607 1347 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MROH7Q68CQ1 1323 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 OR6C70A6NIJ9 312 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 A6NLC8 198 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 NT5C1B-RDH14C9J2C7 533 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MCF2P10911 925 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 PKLRP30613 574 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 SERPINB1P30740 379 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 SLC7A1P30825 629 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 METAP1P53582 386 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 EMP3P54852 163 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 NUP107P57740 925 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 PRKCQQ04759 706 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 SCARB2Q14108 478 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 SPCS2Q15005 226 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 AANATQ16613 207 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 ARMCX4Q5H9R4 360 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 PERM1Q5SV97 790 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 FAM69AQ5T7M9 428 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 FAM171A1Q5VUB5 890 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 DCDC5Q6ZRR9 648 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MRPL10Q7Z7H8 261 aaKnown RBP8.96□□□□□ -0.98
VPS13D-212ENST00000543766 AFAP1L2Q8N4X5 818 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 FAM71DQ8N9W8 422 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 BPIFCQ8NFQ6 507 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 TESCQ96BS2 214 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 TM9SF3Q9HD45 589 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MAN1C1Q9NR34 630 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 GJB4Q9NTQ9 266 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
VPS13D-212ENST00000543766 DISP2A7MBM2 1401 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 CICQ96RK0 1608 aaPredicted RBP8.96□□□□□ -0.98
VPS13D-212ENST00000543766 A0A088AWK7 358 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 POM121BA6NF01 834 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 WRBO00258 174 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF263O14978 683 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TRIM3O75382 744 aaPredicted RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 LRG1P02750 347 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 JUPP14923 745 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 IFNAR1P17181 557 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 RIDAP52758 137 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SLC5A3P53794 718 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TSPAN5P62079 268 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ECT2LQ008S8 904 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 AAK1Q2M2I8 961 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TAF1BQ53T94 588 aaPredicted RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PDZK1Q5T2W1 519 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ATG16L1Q676U5 607 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CHADLQ6NUI6 762 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SUSD1Q6UWL2 747 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 AACSQ86V21 672 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CATSPERDQ86XM0 798 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ADGRG5Q8IZF4 528 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CAMKK1Q8N5S9 505 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ATP6V0D2Q8N8Y2 350 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PIGOQ8TEQ8 1089 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PBKQ96KB5 322 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 BRIP1Q9BX63 1249 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ADAM7Q9H2U9 754 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 LIN7BQ9HAP6 207 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 MOV10Q9HCE1 1003 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SNTG1Q9NSN8 517 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ARL8BQ9NVJ2 186 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF224Q9NZL3 707 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PPT2Q9UMR5 302 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SORCS3Q9UPU3 1222 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 HEMK1Q9Y5R4 338 aaPredicted RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 UBR2Q8IWV8 1755 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 A0A1W2PQC6 194 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 I3L4J1 428 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 I3L521 148 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 DDX3XO00571 662 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 RBBP9O75884 186 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TRIM16O95361 564 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 LYPLA2O95372 231 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CCNB1P14635 433 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF12P17014 697 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 HSD17B3P37058 310 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PSPHP78330 225 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PIWIL3Q7Z3Z3 882 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TRIM59Q8IWR1 403 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 KLHL7Q8IXQ5 586 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CMTM5Q96DZ9 223 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 NSMCE2Q96MF7 247 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 XPO6Q96QU8 1125 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SH2D3AQ9BRG2 576 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 DSCC1Q9BVC3 393 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 C1QTNF7Q9BXJ2 289 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ENTPD7Q9NQZ7 604 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TLR8Q9NR97 1041 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 IMPAD1Q9NX62 359 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CMTM6Q9NX76 183 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 NKIRAS2Q9NYR9 191 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SERPINB13Q9UIV8 391 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TMEM59LQ9UK28 342 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 NUP50Q9UKX7 468 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PCDHB9Q9Y5E1 797 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms