RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ELP6Q0PNE2 266 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 HS1BP3Q53T59 392 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 TPRG1LQ5T0D9 272 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 CFAP58Q5T655 872 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 TMCO3Q6UWJ1 677 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 PARGQ86W56 976 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 OR4C6Q8NH72 309 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 CSPG4P5Q96PW8 444 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 TUBGCP5Q96RT8 1024 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 ATP13A3Q9H7F0 1226 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 PCDH12Q9NPG4 1184 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 MBNL1Q9NR56 388 aaKnown RBP16.57■□□□□ 0.24
CCND1-205ENST00000542367 NENFQ9UMX5 172 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 FREM2Q5SZK8 3169 aa16.57■□□□□ 0.24
CCND1-205ENST00000542367 SRRM3A6NNA2 597 aaPredicted RBP16.56■□□□□ 0.24
CCND1-205ENST00000542367 TAF4O00268 1085 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 MUSKO15146 869 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 CBFA2T2O43439 604 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 CSF2P04141 144 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 SERPINA4P29622 427 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 IGFALSP35858 605 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 CLDN6P56747 220 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 SEMG2Q02383 582 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 BCL2L1Q07817 233 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 SLC10A7Q0GE19 358 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 LBRQ14739 615 aaKnown RBP16.56■□□□□ 0.24
CCND1-205ENST00000542367 SPECC1LQ69YQ0 1117 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 BRAT1Q6PJG6 821 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 ZSWIM9Q86XI8 627 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
CCND1-205ENST00000542367 MDM1Q8TC05 714 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 PSKH2Q96QS6 385 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 C1QTNF7Q9BXJ2 289 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 TSPY26PQ9H489 355 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 CCDC86Q9H6F5 360 aaKnown RBP16.56■□□□□ 0.24
CCND1-205ENST00000542367 PCDH18Q9HCL0 1135 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 SEPT3Q9UH03 358 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 KLF15Q9UIH9 416 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 COQ6Q9Y2Z9 468 aa16.56■□□□□ 0.24
CCND1-205ENST00000542367 IGF2RP11717 2491 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 TRABD2BA6NFA1 517 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 NEMP2A6NFY4 417 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 H3BM21 787 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
CCND1-205ENST00000542367 SCAMP1O15126 338 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 NEBLO76041 1014 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 PRKCGP05129 697 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 ALPPL2P10696 532 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 JUPP14923 745 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 NME1P15531 152 aaKnown RBP16.55■□□□□ 0.24
CCND1-205ENST00000542367 JUNDP17535 347 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 ACP1P24666 158 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 SSR1P43307 286 aaKnown RBP16.55■□□□□ 0.24
CCND1-205ENST00000542367 SCNN1BP51168 640 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 THOP1P52888 689 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 CDH6P55285 790 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 YPEL5P62699 121 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 ILKQ13418 452 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 PTK2BQ14289 1009 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 KRT81Q14533 505 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 HADHQ16836 314 aaKnown RBP16.55■□□□□ 0.24
CCND1-205ENST00000542367 TMCO4Q5TGY1 634 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 ERAP2Q6P179 960 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 PROSER1Q86XN7 944 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 TP53I13Q8NBR0 393 aaPredicted RBP16.55■□□□□ 0.24
CCND1-205ENST00000542367 OR8K1Q8NGG5 319 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 ZNF599Q96NL3 588 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
CCND1-205ENST00000542367 ZFHX4Q86UP3 3567 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 CFAP47Q6ZTR5 3102 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 KNTC1P50748 2209 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 TTC24A2A3L6 582 aaPredicted RBP16.54■□□□□ 0.24
CCND1-205ENST00000542367 MAFKO60675 156 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 H2AFZP0C0S5 128 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 IL4RP24394 825 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 LIG3P49916 1009 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 RENBPP51606 427 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 DAB2P98082 770 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 EIF2B5Q13144 721 aaKnown RBP16.54■□□□□ 0.24
CCND1-205ENST00000542367 MMRN1Q13201 1228 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 TRIM14Q14142 442 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 LRRC14Q15048 493 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 SLC18A3Q16572 532 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 H2AFVQ71UI9 128 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 PAF1Q8N7H5 531 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 ECHDC3Q96DC8 303 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 NSMCE3Q96MG7 304 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 DNAJC7Q99615 494 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 PACSIN1Q9BY11 444 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 NLGN3Q9NZ94 848 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 ATP8A1Q9Y2Q0 1164 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 DMXL2Q8TDJ6 3036 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 ANKRD36A6QL64 1941 aa16.54■□□□□ 0.24
CCND1-205ENST00000542367 LRRK1Q38SD2 2015 aa16.53■□□□□ 0.24
CCND1-205ENST00000542367 K7ESM1 405 aa16.53■□□□□ 0.24
CCND1-205ENST00000542367 TRAFD1O14545 582 aaPredicted RBP16.53■□□□□ 0.24
CCND1-205ENST00000542367 AQP9O43315 295 aa16.53■□□□□ 0.24
CCND1-205ENST00000542367 LZTS3O60299 673 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms