RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 APOBEC3BQ9UH17 382 aaKnown RBP15.79■□□□□ 0.12
VPS33A-206ENST00000542310 SALL4Q9UJQ4 1053 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 U3KQA8 63 aa15.79■□□□□ 0.12
VPS33A-206ENST00000542310 NBEAQ8NFP9 2946 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 A0A1W2PQJ5 194 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 J3KR12 359 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 INSIG1O15503 277 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 MMP20O60882 483 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 LRCH4O75427 683 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 MT-CO3P00414 261 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 ERCC2P18074 760 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 MMP12P39900 470 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 PEX5P50542 639 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 PAPOLAP51003 745 aaKnown RBP15.78■□□□□ 0.12
VPS33A-206ENST00000542310 CA9Q16790 459 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 UGP2Q16851 508 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 KLHL40Q2TBA0 621 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 LRRC73Q5JTD7 316 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 TPRG1LQ5T0D9 272 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 CFAP58Q5T655 872 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 ERAP2Q6P179 960 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 PDZD3Q86UT5 571 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 VPS36Q86VN1 386 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 ARHGAP12Q8IWW6 846 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 PHACTR4Q8IZ21 702 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 LZTR1Q8N653 840 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 IQCDQ96DY2 449 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 CELF6Q96J87 481 aaKnown RBP15.78■□□□□ 0.12
VPS33A-206ENST00000542310 DEPDC7Q96QD5 511 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 SLC39A8Q9C0K1 460 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 ISCUQ9H1K1 167 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 ATP13A3Q9H7F0 1226 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 ZWILCHQ9H900 591 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 SP110Q9HB58 689 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 PCSK1NQ9UHG2 260 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 KLF15Q9UIH9 416 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 LOC400499M0QZD8 3231 aa15.78■□□□□ 0.12
VPS33A-206ENST00000542310 CFAP69A5D8W1 941 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 TMEM110-MUSTN1A8MSY1 372 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 DAPK3O43293 454 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 OPA1O60313 960 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 NEBLO76041 1014 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 SERPINC1P01008 464 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 C6P13671 934 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 SERPINA4P29622 427 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 TPM4P67936 248 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 IL10RBQ08334 325 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 DPYSQ14117 519 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 NR1I3Q14994 352 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 IRF4Q15306 451 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 DPYSL2Q16555 572 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 C19orf48Q6RUI8 117 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 NPWQ8N729 165 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 IFI44Q8TCB0 444 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 SYN2Q92777 582 aaPredicted RBP15.77■□□□□ 0.12
VPS33A-206ENST00000542310 ECHDC3Q96DC8 303 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 NAP1L5Q96NT1 182 aaPredicted RBP15.77■□□□□ 0.12
VPS33A-206ENST00000542310 IL12RB2Q99665 862 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 WRAP53Q9BUR4 548 aaKnown RBP15.77■□□□□ 0.12
VPS33A-206ENST00000542310 CINPQ9BW66 212 aaPredicted RBP15.77■□□□□ 0.12
VPS33A-206ENST00000542310 BOCQ9BWV1 1114 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 TRIM7Q9C029 511 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 PCDH12Q9NPG4 1184 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 ATP8A1Q9Y2Q0 1164 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 BZW2Q9Y6E2 419 aaKnown RBP15.77■□□□□ 0.12
VPS33A-206ENST00000542310 AK5Q9Y6K8 562 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 ASXL3Q9C0F0 2248 aa15.77■□□□□ 0.12
VPS33A-206ENST00000542310 LMO7DNF2Z398 122 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 H3BRJ5 948 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 PALMO75781 387 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 ABCG1P45844 678 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 BLKP51451 505 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 AP1S1P61966 158 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 NSUN2Q08J23 767 aaKnown RBP eCLIP15.76■□□□□ 0.11
VPS33A-206ENST00000542310 LRRC14Q15048 493 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 PPP6R3Q5H9R7 873 aaPredicted RBP15.76■□□□□ 0.11
VPS33A-206ENST00000542310 C6orf132Q5T0Z8 1188 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 TMCO4Q5TGY1 634 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 SRLQ86TD4 932 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 SDR16C5Q8N3Y7 309 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 FSTL5Q8N475 847 aaPredicted RBP15.76■□□□□ 0.11
VPS33A-206ENST00000542310 NETO2Q8NC67 525 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 ATL2Q8NHH9 583 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 LMX1AQ8TE12 382 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 SPOCK2Q92563 424 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 GLMNQ92990 594 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 ZNF599Q96NL3 588 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 LRRC61Q9BV99 259 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 SLC13A1Q9BZW2 595 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 MBNL1Q9NR56 388 aaKnown RBP15.76■□□□□ 0.11
VPS33A-206ENST00000542310 SHROOM3Q8TF72 1996 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 RP1P56715 2156 aa15.76■□□□□ 0.11
VPS33A-206ENST00000542310 EME2A4GXA9 379 aaPredicted RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 TLX3O43711 291 aaPredicted RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 BRINP1O60477 761 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 ACTN2P35609 894 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 HSPA9P38646 679 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 EIF4A3P38919 411 aaKnown RBP15.75■□□□□ 0.11
VPS33A-206ENST00000542310 PBX1P40424 430 aa15.75■□□□□ 0.11
VPS33A-206ENST00000542310 ARL4AP40617 200 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms