RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CASP2P42575 452 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 C1QTNF8P60827 252 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 ZNF789Q5FWF6 425 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 KLC3Q6P597 504 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 CHST15Q7LFX5 561 aaPredicted RBP15.45■□□□□ 0.06
CNOT9-208ENST00000542068 NUP93Q8N1F7 819 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 TMEM151AQ8N4L1 468 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 CYGBQ8WWM9 190 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 RMND5BQ96G75 393 aaPredicted RBP15.45■□□□□ 0.06
CNOT9-208ENST00000542068 SOX17Q9H6I2 414 aaPredicted RBP15.45■□□□□ 0.06
CNOT9-208ENST00000542068 CASS4Q9NQ75 786 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 DSEQ9UL01 958 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 PCDHGA7Q9Y5G6 932 aa15.45■□□□□ 0.06
CNOT9-208ENST00000542068 TTC24A2A3L6 582 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 HEATR9A2RTY3 570 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MRASO14807 208 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 DCLK1O15075 740 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 TRIM25Q14258 630 aaKnown RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 CAPRIN1Q14444 709 aaKnown RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 KCTD21Q4G0X4 260 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 TSTD2Q5T7W7 516 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 REP15Q6BDI9 236 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 C3orf58Q8NDZ4 430 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 CANT1Q8WVQ1 401 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 ERLEC1Q96DZ1 483 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MS4A4AQ96JQ5 239 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 SMOQ99835 787 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 COLEC11Q9BWP8 271 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 C1QTNF1Q9BXJ1 281 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 FSD1LQ9BXM9 530 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 RHOJQ9H4E5 214 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MID2Q9UJV3 735 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 COL1A2P08123 1366 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 RNF103-CHMP3A0A140T963 221 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 SMIM35A0A1B0GVV1 85 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MYADML2A6NDP7 307 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 AP1G1O43747 822 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 DPYSQ14117 519 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 FSCN1Q16658 493 aaKnown RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 PAQR9Q6ZVX9 377 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 OFCC1Q8IZS5 231 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 RIN3Q8TB24 985 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 DDI1Q8WTU0 396 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 PABPC5Q96DU9 382 aaKnown RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 TMEM209Q96SK2 561 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MAF1Q9H063 256 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 OSBPL2Q9H1P3 480 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 EBF1Q9UH73 591 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MYRFQ9Y2G1 1151 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 PRG3Q9Y2Y8 225 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 NR5A2O00482 541 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 LRPAP1P30533 357 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MAGEA12P43365 314 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 ENTPD1P49961 510 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 SH3BGRP55822 239 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 RAB10P61026 200 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 MAXP61244 160 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 LPIN1Q14693 890 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 SETD3Q86TU7 594 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 STYXQ8WUJ0 223 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 CNDP1Q96KN2 507 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 GPR22Q99680 433 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 HNRNPABQ99729 332 aaKnown RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 KATNBL1Q9H079 304 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 TMEM165Q9HC07 324 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 ARHGEF38Q9NXL2 777 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 ABI2Q9NYB9 513 aaPredicted RBP15.44■□□□□ 0.06
CNOT9-208ENST00000542068 NCKIPSDQ9NZQ3 722 aa15.44■□□□□ 0.06
CNOT9-208ENST00000542068 SOCS2O14508 198 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 SUPT7LO94864 414 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 F2P00734 622 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 PIM1P11309 404 aaPredicted RBP15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CHRM3P20309 590 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 SLC1A2P43004 574 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CDH17Q12864 832 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 TRIM74Q86UV6 250 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 TRIM73Q86UV7 250 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 TICAM1Q8IUC6 712 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 MYLPFQ96A32 169 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 HAUS8Q9BT25 410 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 IL22Q9GZX6 179 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 GBA3Q9H227 469 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 FAM105AQ9NUU6 356 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CHCHD3Q9NX63 227 aaKnown RBP15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CNOT6Q9ULM6 557 aaKnown RBP15.43■□□□□ 0.06
CNOT9-208ENST00000542068 FBP2O00757 339 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CES1P23141 567 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 YAP1P46937 504 aaKnown RBP15.43■□□□□ 0.06
CNOT9-208ENST00000542068 PSMD7P51665 324 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
CNOT9-208ENST00000542068 FAM83EQ2M2I3 478 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 UBXN11Q5T124 520 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 LDLRAD1Q5T700 205 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 KLHL35Q6PF15 583 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 SPPL2CQ8IUH8 684 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CNTD1Q8N815 330 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 NPY6RQ99463 290 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 CACNA2D2Q9NY47 1150 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 PAPPA2Q9BXP8 1791 aa15.43■□□□□ 0.06
CNOT9-208ENST00000542068 TADA2AO75478 443 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms