RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CLHC1Q8NHS4 586 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 ZYG11BQ9C0D3 744 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 UBA2Q9UBT2 640 aaPredicted RBP16.21■□□□□ 0.19
VARS2-212ENST00000542001 AP4B1Q9Y6B7 739 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 DNAJA2O60884 412 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 CPSF4O95639 269 aaKnown RBP16.21■□□□□ 0.19
VARS2-212ENST00000542001 GGT5P36269 586 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 TRNP1Q6NT89 227 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 GPRIN1Q7Z2K8 1008 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 C11orf96Q7Z7L8 435 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 DNAJC1Q96KC8 554 aaKnown RBP16.21■□□□□ 0.19
VARS2-212ENST00000542001 KCTD14Q9BQ13 255 aaPredicted RBP16.21■□□□□ 0.19
VARS2-212ENST00000542001 PRKD2Q9BZL6 878 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 TRIM8Q9BZR9 551 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 ZNF180Q9UJW8 692 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 ALDOAP04075 364 aaKnown RBP16.21■□□□□ 0.19
VARS2-212ENST00000542001 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 EMC10Q5UCC4 262 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 GRAMD4Q6IC98 578 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 ADCK2Q7Z695 626 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 SH3KBP1Q96B97 665 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 TEKT5Q96M29 485 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 SMOQ99835 787 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 E9PAM4 449 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 CLOCKO15516 846 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 SNRPB2P08579 225 aaKnown RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 RBM20Q5T481 1227 aaKnown RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 PIWIL4Q7Z3Z4 852 aaKnown RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 HMCESQ96FZ2 354 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 GBA3Q9H227 469 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 SYTL2Q9HCH5 934 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 VTI1BQ9UEU0 232 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 FBXW11Q9UKB1 542 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 H2AFYO75367 372 aaKnown RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 AHSGP02765 367 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 LYNP07948 512 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 NNMTP40261 264 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 SLC1A2P43004 574 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 PWP1Q13610 501 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 BLMHQ13867 455 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 TCEAL1Q15170 157 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 PIM3Q86V86 326 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 PQLC1Q8N2U9 271 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 FCRL3Q96P31 734 aaPredicted RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 CIPCQ9C0C6 399 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 CRTAC1Q9NQ79 661 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 KLQ9UEF7 1012 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 LIMD1Q9UGP4 676 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 C10orf71Q711Q0 1435 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 MYOCOSA0A1B0GUC4 107 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 TGDSO95455 350 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 ABCB1P08183 1280 aaPredicted RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 SLC10A7Q0GE19 358 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 TUSC3Q13454 348 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 LPCAT2Q7L5N7 544 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 RALGPS2Q86X27 583 aaPredicted RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 PANX3Q96QZ0 392 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 LSM7Q9UK45 103 aaKnown RBP16.2■□□□□ 0.18
VARS2-212ENST00000542001 GLI3P10071 1580 aa16.2■□□□□ 0.18
VARS2-212ENST00000542001 IQCF5A8MTL0 148 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 J3KR12 359 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 ZSCAN9O15535 394 aaPredicted RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 OR1D2P34982 312 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SH3BGRP55822 239 aaPredicted RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 CDK18Q07002 472 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 ANO7Q6IWH7 933 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 FAM159BA6NKW6 160 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 MLNP12872 115 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 XRCC1P18887 633 aaPredicted RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 CHRNB3Q05901 458 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 CDC16Q13042 620 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 KRT33BQ14525 404 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 AP5B1Q2VPB7 878 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 HECTD2Q5U5R9 776 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SLC9A4Q6AI14 798 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 PAOXQ6QHF9 649 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SAPCD2Q86UD0 394 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SLC22A9Q8IVM8 553 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 CASP10Q92851 521 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 FAR2Q96K12 515 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 MRPL57Q9BQC6 102 aaKnown RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 SLC25A23Q9BV35 468 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 ROGDIQ9GZN7 287 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 PIDD1Q9HB75 910 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 UBXN8O00124 270 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 SEC22BO75396 215 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 HSPA1AP0DMV8 641 aaKnown RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 HSPA1BP0DMV9 641 aaKnown RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 MYL4P12829 197 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 FASP25445 335 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 GCAP28676 217 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 HALP42357 657 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 KCTD21Q4G0X4 260 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 NOL9Q5SY16 702 aaKnown RBP16.19■□□□□ 0.18
VARS2-212ENST00000542001 GPSM1Q86YR5 675 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 OR13C4Q8NGS5 318 aa16.19■□□□□ 0.18
VARS2-212ENST00000542001 PPM1MQ96MI6 270 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms