RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 RPP25Q9BUL9 199 aaKnown RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 GSX2Q9BZM3 304 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 TM6SF2Q9BZW4 377 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 TASP1Q9H6P5 420 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ACTR5Q9H9F9 607 aaPredicted RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 VPS37BQ9H9H4 285 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 PLAC1Q9HBJ0 212 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ABCB8Q9NUT2 735 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 ZDHHC7Q9NXF8 308 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CLEC1BQ9P126 229 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 LSM7Q9UK45 103 aaKnown RBP7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 SHOC2Q9UQ13 582 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 STARD13Q9Y3M8 1113 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 NFS1Q9Y697 457 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 CAPN7Q9Y6W3 813 aa7.84□□□□□ -1.15
AC005840.3-201ENST00000541888 WASH4PA8MWX3 477 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 H0YHG0 523 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 MATN3O15232 486 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 PRMT3O60678 531 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 OPHN1O60890 802 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 STK10O94804 968 aaKnown RBP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 LUC7L3O95232 432 aaKnown RBP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 CD160O95971 181 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 HNRNPA1P09651 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 CCNCP24863 283 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 NDST2P52849 883 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 CDH4P55283 916 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ARF5P84085 180 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 LMAN2Q12907 356 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 CRYMQ14894 314 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ZNF77Q15935 545 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 C11orf91Q3C1V1 193 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ARHGAP15Q53QZ3 475 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 LY6G5CQ5SRR4 150 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ATXN7L2Q5T6C5 722 aaPredicted RBP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 WLSQ5T9L3 541 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 CASC4Q6P4E1 433 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 BZW1Q7L1Q6 419 aaKnown RBP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 PRPF39Q86UA1 669 aaKnown RBP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 C12orf40Q86WS4 652 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 IQCKQ8N0W5 287 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 OTUD6BQ8N6M0 293 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ZNF366Q8N895 744 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 MYO19Q96H55 970 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ZNF778Q96MU6 729 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 FICDQ9BVA6 458 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 BBS2Q9BXC9 721 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 PLA2G2FQ9BZM2 168 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 GBA3Q9H227 469 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 PABPC3Q9H361 631 aaKnown RBP7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 EBF3Q9H4W6 596 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 SFXN1Q9H9B4 322 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 SYBUQ9NX95 663 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 VPS28Q9UK41 221 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 MAFFQ9ULX9 164 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 ARHGAP26Q9UNA1 814 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 LAMA1P25391 3075 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 VPS13AQ96RL7 3174 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 MYO10Q9HD67 2058 aa7.83□□□□□ -1.16
AC005840.3-201ENST00000541888 TICRRQ7Z2Z1 1910 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 POC1B-GALNT4F8VUJ3 575 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 GOLGA8TH3BQL2 631 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 CCL22O00626 93 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 MSTNO14793 375 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 CHADO15335 359 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 NCAM2O15394 837 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 SMAD6O43541 496 aaKnown RBP7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 BUD23O43709 281 aaKnown RBP7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 UGT1A9O60656 530 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 FAM155BO75949 473 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 SLC4A1P02730 911 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 MMP2P08253 660 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 GRNP28799 593 aaKnown RBP7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 HLA-FP30511 346 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 HOXA9P31269 272 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 ADH7P40394 386 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 MMP13P45452 471 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 IRX1P78414 480 aaPredicted RBP7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 SEMG2Q02383 582 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 IFFO1Q0D2I5 559 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 SEMA5AQ13591 1074 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 EMC10Q5UCC4 262 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 MARC1Q5VT66 337 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 FYB2Q5VWT5 728 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 FBXW10Q5XX13 1052 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 TANGO2Q6ICL3 276 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 TRMT10BQ6PF06 316 aaKnown RBP7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 CCHCR1Q8TD31 782 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 MYADMQ96S97 322 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 IL12RB2Q99665 862 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 SPOCK3Q9BQ16 436 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 FEM1AQ9BSK4 669 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 TNKS2Q9H2K2 1166 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 PRO3102Q9H379 93 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 MTG2Q9H4K7 406 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 NSUN3Q9H649 340 aaKnown RBP7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 UGT1A7Q9HAW7 530 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 UGT1A10Q9HAW8 530 aa7.82□□□□□ -1.16
AC005840.3-201ENST00000541888 UGT1A8Q9HAW9 530 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms