RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 HDAC8Q9BY41 377 aa9.9□□□□□ -0.82
CHFR-220ENST00000541817 MFRPQ9BY79 579 aa9.9□□□□□ -0.82
CHFR-220ENST00000541817 GTPBP4Q9BZE4 634 aaKnown RBP9.9□□□□□ -0.82
CHFR-220ENST00000541817 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
CHFR-220ENST00000541817 B3GNT4Q9C0J1 378 aa9.9□□□□□ -0.82
CHFR-220ENST00000541817 CYP4F12Q9HCS2 524 aa9.9□□□□□ -0.82
CHFR-220ENST00000541817 SAMSN1Q9NSI8 373 aaKnown RBP9.9□□□□□ -0.82
CHFR-220ENST00000541817 APPL1Q9UKG1 709 aa9.9□□□□□ -0.82
CHFR-220ENST00000541817 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
CHFR-220ENST00000541817 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
CHFR-220ENST00000541817 RP1L1Q8IWN7 2480 aaPredicted RBP9.9□□□□□ -0.83
CHFR-220ENST00000541817 CHD5Q8TDI0 1954 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 A0A1B0GTH6 734 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 AKR1B15C9JRZ8 316 aaPredicted RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 XPO1O14980 1071 aaKnown RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 RPN1P04843 607 aaKnown RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 ALPIP09923 528 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 ADRB3P13945 408 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 GLB1P16278 677 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 ALDH4A1P30038 563 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 ABL2P42684 1182 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 NEK3P51956 506 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 HK3P52790 923 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 PLK1P53350 603 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 COPB1P53618 953 aaKnown RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 RAD23BP54727 409 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 STX17P56962 302 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 CLDN10P78369 228 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 CUL4BQ13620 913 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 E2F4Q16254 413 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 HSP90AA4PQ58FG1 418 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 C1orf220Q5T0J3 134 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 CERCAMQ5T4B2 595 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 ZNF658Q5TYW1 1059 aaPredicted RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 NKAIN2Q5VXU1 208 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 LINGO4Q6UY18 593 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 SYT10Q6XYQ8 523 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 GKN2Q86XP6 184 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 FSTL5Q8N475 847 aaPredicted RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 ATP11CQ8NB49 1132 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 FAM46DQ8NEK8 389 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 TMIEQ8NEW7 156 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 TBATAQ96M53 351 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 LENG8Q96PV6 779 aaPredicted RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 HAPLN3Q96S86 360 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 FEM1AQ9BSK4 669 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 C1QTNF2Q9BXJ5 285 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 NAA15Q9BXJ9 866 aaKnown RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 TRIM55Q9BYV6 548 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 INTS2Q9H0H0 1204 aaKnown RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 CUEDC2Q9H467 287 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 MMRN2Q9H8L6 949 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 TMEM9Q9P0T7 183 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 IL36AQ9UHA7 158 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 RWDD2AQ9UIY3 292 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 SLC5A6Q9Y289 635 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 KCTD3Q9Y597 815 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.89□□□□□ -0.835e-9■■■■□ 24.2
CHFR-220ENST00000541817 OAS3Q9Y6K5 1087 aaKnown RBP9.89□□□□□ -0.83
CHFR-220ENST00000541817 LRP4O75096 1905 aa9.89□□□□□ -0.83
CHFR-220ENST00000541817 EIF3DO15371 548 aaKnown RBP eCLIP9.88□□□□□ -0.83
CHFR-220ENST00000541817 RFPL1O75677 317 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 SORBS2O94875 1100 aaKnown RBP9.88□□□□□ -0.83
CHFR-220ENST00000541817 CPNE6O95741 557 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 PRNPP04156 253 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 ITIH2P19823 946 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 PPP1R2P41236 205 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 AP3M2P53677 418 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 SLC8A3P57103 927 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
CHFR-220ENST00000541817 CCDC15Q0P6D6 951 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 PAK1Q13153 545 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 SLC12A1Q13621 1099 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 ZC3H12AQ5D1E8 599 aaKnown RBP9.88□□□□□ -0.83
CHFR-220ENST00000541817 LRRC73Q5JTD7 316 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 CDKAL1Q5VV42 579 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 ARHGAP17Q68EM7 881 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 LVRNQ6Q4G3 990 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 ENPP7Q6UWV6 458 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 MACC1Q6ZN28 852 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 DPY19L3Q6ZPD9 716 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 PARS2Q7L3T8 475 aaKnown RBP9.88□□□□□ -0.83
CHFR-220ENST00000541817 OR6C4Q8NGE1 309 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 TAS1R2Q8TE23 839 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 DQX1Q8TE96 717 aaKnown RBP9.88□□□□□ -0.83
CHFR-220ENST00000541817 TAF4BQ92750 862 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 CENPTQ96BT3 561 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 SLC39A13Q96H72 371 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 PANX2Q96RD6 677 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
CHFR-220ENST00000541817 NIF3L1Q9GZT8 377 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 BLZF1Q9H2G9 400 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 CYP3A43Q9HB55 503 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 VPS28Q9UK41 221 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 TSPAN16Q9UKR8 245 aa9.88□□□□□ -0.83
CHFR-220ENST00000541817 NAV3Q8IVL0 2385 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms