RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 DPP7Q9UHL4 492 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 AGO1Q9UL18 857 aaKnown RBP14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 TCAF1Q9Y4C2 921 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 HTTP42858 3142 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 HEATR9A2RTY3 570 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 B2RBV5 119 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 SPECC1L-ADORA2AF8WAN1 911 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 TGM5O43548 720 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 TM7SF2O76062 418 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 TOP3BO95985 862 aaKnown RBP14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 ACADSP16219 412 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 ATP6V1C1P21283 382 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 PDE1BQ01064 536 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 NSUN2Q08J23 767 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 C16orf46Q6P387 395 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 KIAA0408Q6ZU52 694 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 OTOP3Q7RTS5 596 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 ZNF557Q8N988 423 aaPredicted RBP14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 MGME1Q9BQP7 344 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 FSD1LQ9BXM9 530 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 ARMCX1Q9P291 453 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 TXNDC16Q9P2K2 825 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 SLC17A6Q9P2U8 582 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 NUP205Q92621 2012 aa14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 MYO18AQ92614 2054 aaKnown RBP14.8□□□□□ -0.04
SPOCK3-226ENST00000541354 CCDC195A0A1B0GUA6 201 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ITM2AO43736 263 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 PSMG1O95456 288 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 CXCL14O95715 111 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ERVK-10P10266 1014 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 PSMA3P25788 255 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TYK2P29597 1187 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 PGM1P36871 562 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 KLHL23Q8NBE8 558 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 PSKH2Q96QS6 385 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 FAM167BQ9BTA0 163 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ZBED2Q9BTP6 218 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 SNX15Q9NRS6 342 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TMEM216Q9P0N5 145 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 SLC4A7Q9Y6M7 1214 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ZFP37Q9Y6Q3 630 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 HMBSP08397 361 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 HNRNPA1P09651 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 MBL2P11226 248 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 HOXD9P28356 352 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 WNT3AP56704 352 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 KPNB1Q14974 876 aaKnown RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TAF11Q15544 211 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ELMSAN1Q6PJG2 1045 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 OTOP2Q7RTS6 562 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TFAP2DQ7Z6R9 452 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 DCLK2Q8N568 766 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 RBM15BQ8NDT2 890 aaKnown RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ARRDC2Q8TBH0 407 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 CALML6Q8TD86 181 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ZNF669Q96BR6 464 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 PRICKLE1Q96MT3 831 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 FICDQ9BVA6 458 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 DNAJC16Q9Y2G8 782 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ZBBXA8MT70 800 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 GREM1O60565 184 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 H2AFYO75367 372 aaKnown RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 FGF1P05230 155 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 CPOXP36551 454 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 VHLP40337 213 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ABCE1P61221 599 aaKnown RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 SLC34A1Q06495 639 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 BLMHQ13867 455 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TRMT5Q32P41 509 aaKnown RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 INO80DQ53TQ3 878 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ZCCHC23Q6ZST2 131 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 DENND1CQ8IV53 801 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 C10orf107Q8IVU9 208 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 PPP1R14CQ8TAE6 165 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 ZNF334Q9HCZ1 680 aaPredicted RBP14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TREX1Q9NSU2 369 aa14.79□□□□□ -0.04
SPOCK3-226ENST00000541354 TMEM114B3SHH9 223 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 KLKB1P03952 638 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 RHOCP08134 193 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 MMP2P08253 660 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 FAM117BQ6P1L5 589 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 MRPL43Q8N983 215 aaKnown RBP14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 NETO2Q8NC67 525 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 KREMEN2Q8NCW0 462 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 WDR60Q8WVS4 1066 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 BADQ92934 168 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 MIEF2Q96C03 454 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 EBF4Q9BQW3 602 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 RNF38Q9H0F5 515 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 UBA2Q9UBT2 640 aaPredicted RBP14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 ANKRD6Q9Y2G4 727 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 TRAV19A0A0A6YYK7 116 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 J3KR12 359 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 GLUD1P00367 558 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 ENO1P06733 434 aaKnown RBP14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 RALBP11234 206 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 CPA3P15088 417 aa14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 SERPINH1P50454 418 aaKnown RBP14.78□□□□□ -0.04
SPOCK3-226ENST00000541354 SLC12A1Q13621 1099 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms