RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 CLSTN1O94985 981 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 MOCS3O95396 460 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 IL1BP01584 269 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CSF2P04141 144 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 RPN1P04843 607 aaKnown RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 HNRNPA2B1P22626 353 aaKnown RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 UGT1A5P35504 534 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 KIR3DL1P43629 444 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SGSHP51688 502 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 PDX1P52945 283 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 POLE2P56282 527 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 YWHAGP61981 247 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CYP4F2P78329 520 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 ECT2LQ008S8 904 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 INCA1Q0VD86 236 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SRSF6Q13247 344 aaKnown RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 KCNAB2Q13303 367 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 BIRC3Q13489 604 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CDKN3Q16667 212 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 POM121L1PQ3SYA9 428 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 RAB41Q5JT25 222 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 RNF219Q5W0B1 726 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 PM20D1Q6GTS8 502 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 OGFOD2Q6N063 350 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 NEK5Q6P3R8 708 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 RAB11FIP2Q7L804 512 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 ABI3BPQ7Z7G0 1075 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 JAMLQ86YT9 394 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 WFDC3Q8IUB2 231 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 MFN1Q8IWA4 741 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC65Q8IXS2 484 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 STK40Q8N2I9 435 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 TAB3Q8N5C8 712 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 XXYLT1Q8NBI6 393 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF548Q8NEK5 533 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 OR6P1Q8NGX9 317 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 WFDC5Q8TCV5 224 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 RNF139Q8WU17 664 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 HTR3CQ8WXA8 447 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 TAF4BQ92750 862 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 PTPRN2Q92932 1015 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 NAT6Q93015 286 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 MIB2Q96AX9 1013 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 HRASLS5Q96KN8 279 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SPAG5Q96R06 1193 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CALN1Q9BXU9 219 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 STRADBQ9C0K7 418 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 DNAI2Q9GZS0 605 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 ATP13A1Q9HD20 1204 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 AGPAT3Q9NRZ7 376 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 PANK4Q9NVE7 773 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SUCOQ9UBS9 1254 aaKnown RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 HMGXB4Q9UGU5 601 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SLCO3A1Q9UIG8 710 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 INTS6Q9UL03 887 aaKnown RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CA5BQ9Y2D0 317 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 NF1P21359 2839 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 MTORP42345 2549 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SPTY2D1-AS1A0A0U1RR47 76 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 A0A1W2PQ27 194 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 A0A1W2PQ64 194 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 A0A1W2PQC6 194 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 A0A1W2PQU0 124 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TYW5A2RUC4 315 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 C1QTNF3-AMACRE9PGA6 284 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 EIF3DO15371 548 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 TGFB1I1O43294 461 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 AQP9O43315 295 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 ACSL4O60488 711 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 KIF20AO95235 890 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 VNN1O95497 513 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 ZBED1O96006 694 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 C4BPAP04003 597 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 JMJD7P0C870 316 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CD8BP10966 210 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 PRLRP16471 622 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 WT1P19544 449 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 POU3F2P20265 443 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 ELAVL4P26378 380 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CD82P27701 267 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 HOXD13P35453 343 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 NNMTP40261 264 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CCNFP41002 786 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 SLC11A2P49281 568 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CYP2J2P51589 502 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 METAP1P53582 386 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 PMS1P54277 932 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC15Q0P6D6 951 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 CNTN1Q12860 1018 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 SPIDRQ14159 915 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF284Q2VY69 593 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 FAM133BQ5BKY9 247 aaKnown RBP4.72□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF542PQ5EBM4 170 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 PITRM1Q5JRX3 1037 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 AGBL4Q5VU57 503 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 RRAGBQ5VZM2 374 aa4.72□□□□□ -1.65
SNHG1-214ENST00000540865 NUGGCQ68CJ6 796 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms