RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ACTRT1Q8TDG2 376 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 NKD2Q969F2 451 aaPredicted RBP15.63■□□□□ 0.09
DDB1-218ENST00000540784 ECHDC3Q96DC8 303 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 LOXL4Q96JB6 756 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 FEM1CQ96JP0 617 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 RBM15Q96T37 977 aaKnown RBP eCLIP15.63■□□□□ 0.093e-7■■□□□ 13.6
DDB1-218ENST00000540784 TMEM121Q9BTD3 319 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 C6orf106Q9H6K1 298 aaPredicted RBP15.63■□□□□ 0.09
DDB1-218ENST00000540784 PREBQ9HCU5 417 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 PHTF1Q9UMS5 762 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 DRG1Q9Y295 367 aaKnown RBP15.63■□□□□ 0.09
DDB1-218ENST00000540784 PCDHB9Q9Y5E1 797 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 FADS3Q9Y5Q0 445 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 WDFY4Q6ZS81 3184 aa15.63■□□□□ 0.09
DDB1-218ENST00000540784 PROB1E7EW31 1015 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 PGRMC1O00264 195 aaKnown RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 TSPAN6O43657 245 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 AP1G1O43747 822 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 GCATO75600 419 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 FSBPO95073 299 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 PGLSO95336 258 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 LMNAP02545 664 aaKnown RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 MMP2P08253 660 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 NFKB1P19838 968 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 CD68P34810 354 aaPredicted RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 IHHQ14623 411 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 OASLQ15646 514 aaKnown RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 WDR45BQ5MNZ6 344 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 LAIR1Q6GTX8 287 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 ERAP2Q6P179 960 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 DRICH1Q6PGQ1 229 aaPredicted RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 ARMCX6Q7L4S7 300 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 PRPF39Q86UA1 669 aaKnown RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 SUMF1Q8NBK3 374 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 CCDC110Q8TBZ0 833 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 FCRL5Q96RD9 977 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 AP1M1Q9BXS5 423 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 RSPH14Q9UHP6 348 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 SMG5Q9UPR3 1016 aaKnown RBP15.62■□□□□ 0.09
DDB1-218ENST00000540784 CHKBQ9Y259 395 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 SHROOM3Q8TF72 1996 aa15.62■□□□□ 0.09
DDB1-218ENST00000540784 MEI4A8MW99 385 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 UPK3BL1B0FP48 263 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 UPK3BL2E5RIL1 263 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 OPHN1O60890 802 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 RNGTTO60942 597 aaKnown RBP15.61■□□□□ 0.09
DDB1-218ENST00000540784 ITGAVP06756 1048 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 ITIH2P19823 946 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 NFKBIAP25963 317 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 ABL2P42684 1182 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 PTGER3P43115 390 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 CCR5P51681 352 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 FAM193AP78312 1265 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 ELP6Q0PNE2 266 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 PRPSAP1Q14558 356 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 LYSMD4Q5XG99 296 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 CCDC70Q6NSX1 233 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 ZSWIM9Q86XI8 627 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 SLC41A1Q8IVJ1 513 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 RGL4Q8IZJ4 473 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 PRELID2Q8N945 189 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 SPATA22Q8NHS9 363 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 MAGOHBQ96A72 148 aaKnown RBP15.61■□□□□ 0.09
DDB1-218ENST00000540784 BIRC7Q96CA5 298 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 HSPA12BQ96MM6 686 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 SPATA13Q96N96 652 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 ADGRE3Q9BY15 652 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 PCDH9Q9HC56 1237 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 PCDH12Q9NPG4 1184 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 UBP1Q9NZI7 540 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 FAM153AQ9UHL3 310 aa15.61■□□□□ 0.09
DDB1-218ENST00000540784 TPX2Q9ULW0 747 aaKnown RBP15.61■□□□□ 0.09
DDB1-218ENST00000540784 A0A1W2PQU0 124 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 AREL1O15033 823 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 FZD6O60353 706 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 PMPCBO75439 489 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 ANXA9O76027 345 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 MT-CYBP00156 380 aaPredicted RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 CPP00450 1065 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 PDHA1P08559 390 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 ACTN2P35609 894 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 EPHB1P54762 984 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 RPL26P61254 145 aaKnown RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 RPS21P63220 83 aaKnown RBP15.6■□□□□ 0.09
DDB1-218ENST00000540784 CREB5Q02930 508 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 SLC14A2Q15849 920 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 PCSK7Q16549 785 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 PARP6Q2NL67 630 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 LRRC73Q5JTD7 316 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 ARHGEF18Q6ZSZ5 1173 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 NYAP1Q6ZVC0 841 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 GSTA5Q7RTV2 222 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 KDELC2Q7Z4H8 507 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 ATL2Q8NHH9 583 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 PIH1D2Q8WWB5 315 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 SNX19Q92543 992 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 SPOCK2Q92563 424 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 TADA1Q96BN2 335 aa15.6■□□□□ 0.09
DDB1-218ENST00000540784 IFT43Q96FT9 208 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms