RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 IPO11Q9UI26 975 aaKnown RBP12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 FBXO4Q9UKT5 387 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 ARL2BPQ9Y2Y0 163 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 RPS6KL1Q9Y6S9 549 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 RIF1Q5UIP0 2472 aaKnown RBP12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 DMDP11532 3685 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 PRR23AA6NEV1 266 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 CCT8L1PA6NM43 557 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 PIAS1O75925 651 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 DHRS4L1P0CG22 281 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 CHRNB1P11230 501 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 FOXN2P32314 431 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 MPP3Q13368 585 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 RUNX3Q13761 415 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 PON2Q15165 354 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 DBN1Q16643 649 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 TXNDC11Q6PKC3 985 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 TSSK4Q6SA08 328 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 MIB1Q86YT6 1006 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 GBP7Q8N8V2 638 aaPredicted RBP12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 ATP2A3Q93084 1043 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 CERS2Q96G23 380 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 TBL1YQ9BQ87 522 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 RBM22Q9NW64 420 aaKnown RBP eCLIP12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 MPP6Q9NZW5 540 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 ZFATQ9P243 1243 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 SOX13Q9UN79 622 aa12.09□□□□□ -0.47
CYB561A3-215ENST00000540317 ZNF840PA6NDX5 716 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 GOLGA8RI6L899 631 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 LMNAP02545 664 aaKnown RBP12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 CRHR1P34998 444 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 GP5P40197 560 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 HADHAP40939 763 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 SLC11A2P49281 568 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 HARS2P49590 506 aaKnown RBP12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 CRADDP78560 199 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 LRRC32Q14392 662 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 C5orf22Q49AR2 442 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 ANKRD20A4Q4UJ75 823 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 LACTB2Q53H82 288 aaPredicted RBP12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 PCID2Q5JVF3 399 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 FAM182AQ5T1J6 154 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 FBXL22Q6P050 247 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 PACS1Q6VY07 963 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 RASSF3Q86WH2 238 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 SH3RF2Q8TEC5 729 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 ZNF75CPQ92670 426 aaPredicted RBP12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 PLD4Q96BZ4 506 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 KIFC1Q9BW19 673 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 SLC25A51Q9H1U9 297 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 CHRDQ9H2X0 955 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 MRM3Q9HC36 420 aaKnown RBP12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 VPS45Q9NRW7 570 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 DUS2Q9NX74 493 aaKnown RBP12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 PLLPQ9Y342 182 aa12.08□□□□□ -0.48
CYB561A3-215ENST00000540317 OTOL1A6NHN0 477 aaPredicted RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 F5H5T6 163 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 MYO1CO00159 1063 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 EDF1O60869 148 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RFPL1O75677 317 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 TBX18O95935 607 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 ARSAP15289 507 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 TACR2P21452 398 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 SPRP35270 261 aaPredicted RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 ETV4P43268 484 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 CSE1LP55060 971 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 PDGFRLQ15198 375 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 ZNF528Q3MIS6 628 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 DGKKQ5KSL6 1271 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 HECTD3Q5T447 861 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 MARC1Q5VT66 337 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RAP1GAP2Q684P5 730 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RNF43Q68DV7 783 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 ARHGAP36Q6ZRI8 547 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RIN3Q8TB24 985 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RAB3IL1Q8TBN0 382 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 USP33Q8TEY7 942 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 CCT6BQ92526 530 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 ZNF669Q96BR6 464 aaPredicted RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RPRD1AQ96P16 312 aaPredicted RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 SRPK1Q96SB4 655 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 DDX50Q9BQ39 737 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 FSD1LQ9BXM9 530 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 NACA2Q9H009 215 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 RNF38Q9H0F5 515 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 NOL6Q9H6R4 1146 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 MANSC1Q9H8J5 431 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 SP110Q9HB58 689 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 HPS4Q9NQG7 708 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 KLHL14Q9P2G3 628 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 PHTF1Q9UMS5 762 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 GREB1Q4ZG55 1949 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 TICRRQ7Z2Z1 1910 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 VPS13AQ96RL7 3174 aa12.07□□□□□ -0.48
CYB561A3-215ENST00000540317 MYO18AQ92614 2054 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms