RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 KLF1Q13351 362 aaPredicted RBP8.76□□□□□ -1.01
DDB1-217ENST00000540166 TAF5Q15542 800 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 ARL13BQ3SXY8 428 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 FGD3Q5JSP0 725 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 C11orf74Q86VG3 221 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 FAM156AQ8NDB6 213 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 NKD2Q969F2 451 aaPredicted RBP8.76□□□□□ -1.01
DDB1-217ENST00000540166 ZNF512Q96ME7 567 aaPredicted RBP8.76□□□□□ -1.01
DDB1-217ENST00000540166 GAD1Q99259 594 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 MRPL4Q9BYD3 311 aaKnown RBP8.76□□□□□ -1.01
DDB1-217ENST00000540166 FRMD8P1Q9BZ68 369 aaPredicted RBP8.76□□□□□ -1.01
DDB1-217ENST00000540166 COG4Q9H9E3 785 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 ERGIC3Q9Y282 383 aa8.76□□□□□ -1.01
DDB1-217ENST00000540166 SNPHO15079 494 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 TSPAN9O75954 239 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 BMP10O95393 424 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 THP07101 528 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 TCF4P15884 667 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 GABRB2P47870 512 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 IST1P53990 364 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CSE1LP55060 971 aaKnown RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 NME5P56597 212 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 ZNF699Q32M78 642 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 FAM182AQ5T1J6 154 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 DRICH1Q6PGQ1 229 aaPredicted RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 TRAF7Q6Q0C0 670 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 KCTD8Q6ZWB6 473 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MON1BQ7L1V2 547 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 SLC15A4Q8N697 577 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 ZNF420Q8TAQ5 688 aaPredicted RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 RIN3Q8TB24 985 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 SHKBP1Q8TBC3 707 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 DDX1Q92499 740 aaKnown RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 TRIM63Q969Q1 353 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 OMA1Q96E52 524 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 NEURL2Q9BR09 285 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 SLC38A7Q9NVC3 462 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 DNAJC28Q9NX36 388 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 SIRPGQ9P1W8 387 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 COQ4Q9Y3A0 265 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 ST14Q9Y5Y6 855 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 DGKBQ9Y6T7 804 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MCM3APO60318 1980 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 hCG_1818297A0A087WSY0 165 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 TRIM16O95361 564 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 GLUD1P00367 558 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CNTFP26441 200 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 APOFQ13790 326 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MGAT5BQ3V5L5 792 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 TIGD2Q4W5G0 525 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 IL23RQ5VWK5 629 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 C10orf107Q8IVU9 208 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 PDPRQ8NCN5 879 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 TFB1MQ8WVM0 346 aaKnown RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 S100ZQ8WXG8 99 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 FAM122AQ96E09 287 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CPB2Q96IY4 423 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MAGED4Q96JG8 741 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MFSD14AQ96MC6 490 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 DEPDC7Q96QD5 511 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 GTSE1Q9NYZ3 720 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 PLXNB2O15031 1838 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 H0Y626 953 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 EIF3FO00303 357 aaPredicted RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 GRM6O15303 877 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 AQP9O43315 295 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MED7O43513 233 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CXCL10P02778 98 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CAPN1P07384 714 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CKMT2P17540 419 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 PBX3P40426 434 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MTHFRP42898 656 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 MAPRE1Q15691 268 aaKnown RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 CLPPQ16740 277 aaPredicted RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 FAM102AQ5T9C2 384 aaPredicted RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 TDRD10Q5VZ19 366 aaKnown RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 PGM2L1Q6PCE3 622 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 CYP2U1Q7Z449 544 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 FLCNQ8NFG4 579 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 HTRA1Q92743 480 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 GLMNQ92990 594 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 SGF29Q96ES7 293 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 RPF1Q9H9Y2 349 aaKnown RBP8.75□□□□□ -1.01
DDB1-217ENST00000540166 C17orf75Q9HAS0 396 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 TRIM39Q9HCM9 518 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 ZC4H2Q9NQZ6 224 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 HACD3Q9P035 362 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 PCDHGB4Q9UN71 923 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 PCDHGB5Q9Y5G0 923 aa8.75□□□□□ -1.01
DDB1-217ENST00000540166 H3BNC9 293 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 FAM189A1O60320 539 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 SNAP91O60641 907 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 GABBR2O75899 941 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
DDB1-217ENST00000540166 VAPBO95292 243 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 PIM1P11309 404 aaPredicted RBP8.74□□□□□ -1.01
DDB1-217ENST00000540166 FASP25445 335 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 PSMA4P25789 261 aaKnown RBP8.74□□□□□ -1.01
DDB1-217ENST00000540166 GATMP50440 423 aa8.74□□□□□ -1.01
DDB1-217ENST00000540166 SESN2P58004 480 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms