RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ISL2Q96A47 359 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 KCNA7Q96RP8 456 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ZBTB26Q9HCK0 441 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PDP2Q9P2J9 529 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 SLC27A5Q9Y2P5 690 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 TCAF2A6NFQ2 919 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 HAS3O00219 553 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 FESP07332 822 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 CHRM3P20309 590 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PBX3P40426 434 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 CDKN2DP55273 166 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PRAMEP78395 509 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PTPRRQ15256 657 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PIK3R6Q5UE93 754 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ANKRD23Q86SG2 305 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PPWD1Q96BP3 646 aaKnown RBP13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 NR1H4Q96RI1 486 aaPredicted RBP13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ARHGAP39Q9C0H5 1083 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 PIF1Q9H611 641 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ARL5AQ9Y689 179 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 AP4B1Q9Y6B7 739 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 V9GYQ6 96 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 TSC2P49815 1807 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 A8MT66 165 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TNPO2O14787 897 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 ANXA9O76027 345 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 UGT1A6P19224 532 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 HUNKP57058 714 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 ECT2LQ008S8 904 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 GPR162Q16538 588 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 PIGGQ5H8A4 983 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 JADE3Q92613 823 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TBATAQ96M53 351 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 NSUN5Q96P11 429 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 SERPINI1Q99574 410 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 EFCAB1Q9HAE3 211 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 UXTQ9UBK9 157 aaPredicted RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 GOLGA8CPA6NN73 597 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TARM1B6A8C7 271 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 MATN3O15232 486 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 ME2P23368 584 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 DBN1Q16643 649 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 GSTA3Q16772 222 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 KIF19Q2TAC6 998 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TMEM207Q6UWW9 146 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 CUZD1Q86UP6 607 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 IFNEQ86WN2 208 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TMEM86AQ8N2M4 240 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 RP9Q8TA86 221 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 GRIN3AQ8TCU5 1115 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 LRTOMTQ8WZ04 291 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 C3orf30Q96M34 536 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 VAT1Q99536 393 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 MCMBPQ9BTE3 642 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TRMT13Q9NUP7 481 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 DDX18Q9NVP1 670 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 HCSTQ9UBK5 93 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 EGFL7Q9UHF1 273 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 PSMD13Q9UNM6 376 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 FAM50BQ9Y247 325 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 BTRCQ9Y297 605 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 UBA6A0AVT1 1052 aaPredicted RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 AHCYL1O43865 530 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 CRTAMO95727 393 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 CASP2P42575 452 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 FASTKQ14296 549 aaKnown RBP13.75□□□□□ -0.21
BNIP3-202ENST00000540159 CROCCQ5TZA2 2017 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 TRPV1Q8NER1 839 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 HMGCLL1Q8TB92 370 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 EME1Q96AY2 570 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 MYEOVQ96EZ4 313 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 SPATA16Q9BXB7 569 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 SP110Q9HB58 689 aa13.75□□□□□ -0.21
BNIP3-202ENST00000540159 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 UBFD1O14562 309 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 CCNCP24863 283 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 ARL1P40616 181 aaPredicted RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 OR1G1P47890 313 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 HCAR3P49019 387 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 COG7P83436 770 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 TSPY1Q01534 308 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 CAPRIN1Q14444 709 aaKnown RBP13.74□□□□□ -0.21
BNIP3-202ENST00000540159 PLA2G4EQ3MJ16 856 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 KLHDC9Q8NEP7 349 aa13.74□□□□□ -0.21
BNIP3-202ENST00000540159 PDCD6IPQ8WUM4 868 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms