RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ADI1Q9BV57 179 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 RPF2Q9H7B2 306 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 PFDN4Q9NQP4 134 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 FAM155AB1AL88 458 aaPredicted RBP14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 COQ9O75208 318 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 CYP2C8P10632 490 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 CHRNA4P43681 627 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 TGFBIQ15582 683 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 C9orf57Q5W0N0 161 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 IPMKQ8NFU5 416 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 TANKQ92844 425 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 PBXIP1Q96AQ6 731 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 THAP11Q96EK4 314 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 CAMKK2Q96RR4 588 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 NXF3Q9H4D5 531 aaKnown RBP14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 CACNG4Q9UBN1 327 aa14.03□□□□□ -0.16
SCNN1A-215ENST00000540037 NME4O00746 187 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 SRP72O76094 671 aaKnown RBP14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 ALDOCP09972 364 aaKnown RBP14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 NPY2RP49146 381 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 HK2P52789 917 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 CDH17Q12864 832 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 RAB39AQ14964 217 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 ZNF470Q6ECI4 717 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 ERMP1Q7Z2K6 904 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 OR2T34Q8NGX1 318 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 OR2T3Q8NH03 318 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 WNT8BQ93098 351 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 NT5C3BQ969T7 300 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 TCF12Q99081 682 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 ERAP1Q9NZ08 941 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 ZNHIT2Q9UHR6 403 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 SARDHQ9UL12 918 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 OAZ3Q9UMX2 235 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.16
SCNN1A-215ENST00000540037 A0A087WXM4 84 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 RNF103-CHMP3A0A140T963 221 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 PPP6CO00743 305 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 B4GAT1O43505 415 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 RPL34P49207 117 aaKnown RBP14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 ESRRGP62508 458 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 SQLEQ14534 574 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 PLCL1Q15111 1095 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 NEDD8Q15843 81 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 NANOGP8Q6NSW7 305 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 ANKFN1Q8N957 763 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 SHCBP1Q8NEM2 672 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 OLFM1Q99784 485 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 KIFC1Q9BW19 673 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 WDR6Q9NNW5 1121 aaKnown RBP14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 TXNRD2Q9NNW7 524 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 IGSF5Q9NSI5 407 aa14.02□□□□□ -0.17
SCNN1A-215ENST00000540037 A8MT66 165 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 NPHS1O60500 1241 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 DAB1O75553 588 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 MTHFD1P11586 935 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 BMP2P12643 396 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 KCNC1P48547 511 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 CD97P48960 835 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 APLP1P51693 650 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 MAP3K7CLP57077 242 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 MERTKQ12866 999 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 TRAP1Q12931 704 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 ATP1A4Q13733 1029 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 VPS26BQ4G0F5 336 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 PIWIL4Q7Z3Z4 852 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 UNC93AQ86WB7 457 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 OSTM1Q86WC4 334 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 TBC1D15Q8TC07 691 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 EDEM1Q92611 657 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 TEKT5Q96M29 485 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 SNX25Q9H3E2 840 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 POLR1BQ9H9Y6 1135 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 MEAF6Q9HAF1 191 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 V9GYQ6 96 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 MAGEB16A2A368 324 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 NR5A2O00482 541 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 ARCN1P48444 511 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 CDH13P55290 713 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 SAMD4BQ5PRF9 694 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 BTBD8Q5XKL5 378 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 CRYBG2Q8N1P7 616 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 LRRC43Q8N309 656 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 GFM2Q969S9 779 aaKnown RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 HSFY1Q96LI6 401 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 EFHD1Q9BUP0 239 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 VPS45Q9NRW7 570 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 SELENONQ9NZV5 590 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 MAP10Q9P2G4 905 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 ZBTB11O95625 1053 aaPredicted RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 FUCA1P04066 466 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 LGALS2P05162 132 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 NCAM1P13591 858 aa14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
SCNN1A-215ENST00000540037 UGT1A1P22309 533 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms