RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 SMG7Q92540 1137 aaKnown RBP6.9□□□□□ -1.3
TRAV11-201ENST00000539512 MXRA8Q9BRK3 442 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 EIF2B3Q9NR50 452 aaKnown RBP6.9□□□□□ -1.3
TRAV11-201ENST00000539512 SMYD2Q9NRG4 433 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 EHD2Q9NZN4 543 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 HAO1Q9UJM8 370 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 KCNE2Q9Y6J6 123 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 SCINQ9Y6U3 715 aa6.9□□□□□ -1.3
TRAV11-201ENST00000539512 LY6G6EA0A0G2JKS1 128 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 ITM2AO43736 263 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 LIASO43766 372 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 ARSBP15848 533 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 SRD5A1P18405 259 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 RYKP34925 604 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 CLDN2P57739 230 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 ERV3-1Q14264 604 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 ZKSCAN2Q63HK3 967 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 CTU1Q7Z7A3 348 aaKnown RBP6.89□□□□□ -1.31
TRAV11-201ENST00000539512 FRMD1Q8N878 549 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 ANKRD52Q8NB46 1076 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 ENGASEQ8NFI3 743 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 TMEM163Q8TC26 289 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 INPP5DQ92835 1189 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 INTS12Q96CB8 462 aaKnown RBP6.89□□□□□ -1.31
TRAV11-201ENST00000539512 RBM38Q9H0Z9 239 aaKnown RBP6.89□□□□□ -1.31
TRAV11-201ENST00000539512 PLEKHA5Q9HAU0 1116 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 BRF2Q9HAW0 419 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 FBXO2Q9UK22 296 aaPredicted RBP6.89□□□□□ -1.31
TRAV11-201ENST00000539512 MKLN1Q9UL63 735 aa6.89□□□□□ -1.31
TRAV11-201ENST00000539512 UTYO14607 1347 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 A0A1W2PQM1 296 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 SEC31AO94979 1220 aaKnown RBP6.88□□□□□ -1.31
TRAV11-201ENST00000539512 ACADMP11310 421 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 EDN2P20800 178 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 DCTDP32321 178 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 EFNA5P52803 228 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 EIF5P55010 431 aaKnown RBP6.88□□□□□ -1.31
TRAV11-201ENST00000539512 P2RX3P56373 397 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 SELENOVP59797 346 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 TMEM115Q12893 351 aaPredicted RBP6.88□□□□□ -1.31
TRAV11-201ENST00000539512 EIF4A2Q14240 407 aaKnown RBP6.88□□□□□ -1.31
TRAV11-201ENST00000539512 DUSP6Q16828 381 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 ESCO2Q56NI9 601 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 DNTTIP2Q5QJE6 756 aaKnown RBP6.88□□□□□ -1.31
TRAV11-201ENST00000539512 ITPRIPL1Q6GPH6 555 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 TSSK4Q6SA08 328 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 SFTPA2Q8IWL1 248 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 DHX40Q8IX18 779 aaKnown RBP6.88□□□□□ -1.31
TRAV11-201ENST00000539512 ADSSL1Q8N142 457 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 PARP16Q8N5Y8 322 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 TEX45Q8NA69 505 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 MIGA1Q8NAN2 632 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 FBXL8Q96CD0 374 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 APOLD1Q96LR9 279 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 ZNF570Q96NI8 536 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 KRTAP4-11Q9BYQ6 195 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 TBC1D22BQ9NU19 505 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 BLOC1S4Q9NUP1 217 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 A3GALT2U3KPV4 340 aa6.88□□□□□ -1.31
TRAV11-201ENST00000539512 B4DGG1 531 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 VWA5AO00534 786 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 ASAP2O43150 1006 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 USO1O60763 962 aaKnown RBP6.87□□□□□ -1.31
TRAV11-201ENST00000539512 RGS11O94810 467 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 HOXB5P09067 269 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 CD58P19256 250 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 PPARGP37231 505 aaPredicted RBP6.87□□□□□ -1.31
TRAV11-201ENST00000539512 LAMB3Q13751 1172 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 FRG1Q14331 258 aaKnown RBP6.87□□□□□ -1.31
TRAV11-201ENST00000539512 C11orf87Q6NUJ2 197 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 TRILQ7L0X0 811 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 PXKQ7Z7A4 578 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 MB21D2Q8IYB1 491 aaPredicted RBP6.87□□□□□ -1.31
TRAV11-201ENST00000539512 CCDC105Q8IYK2 499 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 NEK9Q8TD19 979 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 POMGNT1Q8WZA1 660 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 VCPIP1Q96JH7 1222 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 ZNF778Q96MU6 729 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 CHCHD6Q9BRQ6 235 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 FAM234AQ9H0X4 552 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 ASAH2Q9NR71 780 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 CYSLTR2Q9NS75 346 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 SLC6A13Q9NSD5 602 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 ZBTB40Q9NUA8 1239 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 HIF1ANQ9NWT6 349 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 RNF7Q9UBF6 113 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 PSAT1Q9Y617 370 aa6.87□□□□□ -1.31
TRAV11-201ENST00000539512 FSD2A1L4K1 749 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 ANKRD18BA2A2Z9 1011 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 MYMKA6NI61 221 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 AP3D1O14617 1153 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 SEC14L5O43304 696 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 ETFAP13804 333 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 CDAP32320 146 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 RGS2P41220 211 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 ST3GAL1Q11201 340 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 PDE1CQ14123 709 aaPredicted RBP6.86□□□□□ -1.31
TRAV11-201ENST00000539512 TWIST1Q15672 202 aa6.86□□□□□ -1.31
TRAV11-201ENST00000539512 FSCBQ5H9T9 825 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms